Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0523 |
Symbol | |
ID | 4016857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 592873 |
End bp | 593340 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637954509 |
Product | CheC-like protein |
Protein accession | YP_561538 |
Protein GI | 91791887 |
COG category | [N] Cell motility |
COG ID | [COG1406] Predicted inhibitor of MCP methylation, homolog of CheC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000195961 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTTG AATTTATTAA TCCCTTTTTA GCCTCTTTGT TGAACGTGAT TTCGACCATG GCCAGCATGC AACTCACCCC TGGAAAGCCC CAAGTAAAGA CCCATAATTT AGCTAAGGGT GATATTTCAG GGCTTATGGG CATGGTGGGG CCTAAGACCA AGGGCTCACT TTCAATCACC TTCGAGCAAG GGCTGATTTT AGAGATCATG GACAAGATGC TAGGTGAAAA ACCAGACTTC TTGAACGAGG ATGTCAGTGA TTTGGTGGGC GAAATCACCA ACATGGTCAC AGGTGGCGCT AAAAATTTAC TCAGCGATAA AGGCTATGAT TTCGATATGG CGACCCCAGC GGTAGTCGTA GGTAAAAACC ACAGCATTTC ACATAAAGCC AAAGGCAAAA AAATCCTTAT GCCTTTCAGT CATGCCGCCG GTAATGCCTA TATCGAAATT TGTTTCGACG AAGAGTAA
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Protein sequence | MNVEFINPFL ASLLNVISTM ASMQLTPGKP QVKTHNLAKG DISGLMGMVG PKTKGSLSIT FEQGLILEIM DKMLGEKPDF LNEDVSDLVG EITNMVTGGA KNLLSDKGYD FDMATPAVVV GKNHSISHKA KGKKILMPFS HAAGNAYIEI CFDEE
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