| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0507 |
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| Symbol | rpsI |
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| ID | 4017106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 576396 |
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| End bp | 576788 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954493 |
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| Product | 30S ribosomal protein S9 |
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| Protein accession | YP_561522 |
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| Protein GI | 91791871 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0103] Ribosomal protein S9 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000732186 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGCAA CTCAGTACTA CGGCACTGGC CGTCGCAAAA CATCTACAGC TCGCGTTTTC
GCAAAAGCTG GTAGTGGCAA CATCGTTGTT AACCAACGTC CTCTTGATGT CTATTTTGGT
CGTGAAACGG CTCGTATGGT TGTTCGTCAA CCATTAGAGT TAGTTGAAAT GACTGATAAG
TTAGACATCT ATGTAACAGT GAAGGGCGGT GGTACTACTG GCCAAGCTGG TGCAATTCGT
CACGGTATCA CTCGTGCGTT ATTGCAACTT GATGAAGCAC TACGTCCAAC ATTACGCAGC
GCAGGTTTCG TTACCCGTGA TGCTCGTAAA GTTGAGCGTA AGAAAGTTGG TCTACGTAAA
GCACGTCGTA AGCCACAGTT CTCTAAGCGT TAA
|
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| Protein sequence | MSATQYYGTG RRKTSTARVF AKAGSGNIVV NQRPLDVYFG RETARMVVRQ PLELVEMTDK
LDIYVTVKGG GTTGQAGAIR HGITRALLQL DEALRPTLRS AGFVTRDARK VERKKVGLRK
ARRKPQFSKR
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