Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0506 |
Symbol | rplM |
ID | 4017105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 575953 |
End bp | 576381 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637954492 |
Product | 50S ribosomal protein L13 |
Protein accession | YP_561521 |
Protein GI | 91791870 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0102] Ribosomal protein L13 |
TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000158843 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACTT TTACTGCTAC GCCAGAAACT GTAACTCGTG ACTGGTTTGT TGTTGACGCT GAAGGCAAAA CTTTAGGTCG TATCGCAACT GAAATCGCAA TTCGCTTACG CGGCAAGCAT AAGCCAGAAT ACACTCCACA CGTTGACACT GGTGACTACA TCATCGTTAT CAATGCTGAA AAAGTGACTG TAACTGGTAA CAAAGCTGCT GGTAAGATTT ACTACTCGCA TTCAGGCTTC CCTGGTGGCA TTAAGCAAAT CAGCTTCGAA AAGCTGCAGG CGCAAAAGCC AGAAATGATC ATCGAGAAAG CAGTTAAGGG TATGTTGCCA AAAGGTCCAT TGGGCCGCGC TATGTTCCGT AAACTTAAAG TTTACGCTGG CGTTGAGCAT AACCACGCTG CACAACAACC TCAAGTTCTT GATATCTAA
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Protein sequence | MKTFTATPET VTRDWFVVDA EGKTLGRIAT EIAIRLRGKH KPEYTPHVDT GDYIIVINAE KVTVTGNKAA GKIYYSHSGF PGGIKQISFE KLQAQKPEMI IEKAVKGMLP KGPLGRAMFR KLKVYAGVEH NHAAQQPQVL DI
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