| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0493 |
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| Symbol | |
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| ID | 4017783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 564081 |
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| End bp | 564632 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954479 |
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| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
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| Protein accession | YP_561508 |
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| Protein GI | 91791857 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0050858 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGCAAC AAGGTTTGTA TGGCCCAGTT TCAGATTTAG TCTGGAACAA AGCACAGAAA
ATTAAATTGC TCATCTGCGA TGTGGATGGA GTCTTCTCCG ATGGTCGCAT TTACATGGGT
AACAATGGCG AGGAGCTCAA AGCCTTCCAT ACCCGCGATG GTTATGGGGT ACGTTCACTG
CTAACCAGTG GCTTTGCGGT TGCAGTCATT ACTGGGCGTA AATCTAAAAT TGTCGAAAAC
CGCATGACAG CCCTTGGGAT CAGCCAGATT TATCAAGGCA TAGACGATAA GTTTGTGCCA
TTTAATGCCC TGATGCAACA CTACCAAGTG AGCCCAGAAG AAGTCGCCTA CATAGGTGAT
GACATGGTGG ATTTACCCGT CATGAAAGCG GTCGGCCTTG CCGTGTGTGT TGCCGATGGT
CACCCCTATG TTAAACAACA TGCTCATATG GTGACTCAAA TCAATGGCGG TCATGGTGCA
CTGAGAGAAC TGGCAGATTT ACTGTTATTA AGCCAAGATA AGTTCAACTC GGCTCACGGT
ATGAGTATAT GA
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| Protein sequence | MAQQGLYGPV SDLVWNKAQK IKLLICDVDG VFSDGRIYMG NNGEELKAFH TRDGYGVRSL
LTSGFAVAVI TGRKSKIVEN RMTALGISQI YQGIDDKFVP FNALMQHYQV SPEEVAYIGD
DMVDLPVMKA VGLAVCVADG HPYVKQHAHM VTQINGGHGA LRELADLLLL SQDKFNSAHG
MSI
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