| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0488 |
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| Symbol | |
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| ID | 4017778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 560373 |
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| End bp | 560660 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637954474 |
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| Product | ribosomal subunit interface protein |
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| Protein accession | YP_561503 |
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| Protein GI | 91791852 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.29255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGATCA ATGTAACTGG GCACCATATA GAGATAACCG AATCACTGCG CGAATACATT
AGCGGCAAAT TTTCTAAACT TGAACGCCAC TACGATCAGA TCAATAATGT CCATGTGGTG
CTAAATGTTG AGAAATTACA GCAAATTGCT GAAGCAAGAA TTAGCTTAAG TGGTACAGAA
GTGTTCGCAA CATCAGAGCA TGCCGACATG TACGCTGCCA TAGACATCCT GATCGATAAA
CTCGATCGCC AGGTCATTAA ACACAAAGAG AAGTTAACAA AACACTAA
|
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| Protein sequence | MQINVTGHHI EITESLREYI SGKFSKLERH YDQINNVHVV LNVEKLQQIA EARISLSGTE
VFATSEHADM YAAIDILIDK LDRQVIKHKE KLTKH
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