Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0487 |
Symbol | |
ID | 4017777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 559927 |
End bp | 560370 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637954473 |
Product | PTS IIA-like nitrogen-regulatory protein PtsN |
Protein accession | YP_561502 |
Protein GI | 91791851 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.393864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTTT GTAGCATACT GCAGCCGGAA TGCACCACCT GTGCCACACC GGGCAGTAAG AAAAAGGTAC TGGAACTCAT CAGCGAACTT GTCGCTGCCC AGTACCCACC CCTCTCTGCG CAAGCAGTTT TCGAAAGCCT AGTGGCCAGA GAAAAAATGG GCAGCACAGG AATTGGGAAT GGCATTGCGA TACCACATGG CCGTTTAGAC AATATCACTC AACCAATAGG CGTATTTATC AAATGCGATG AAGCCATAGC ATTCGATGCT ATCGATAAGC AACCTGTTGA TCTACTATTT GCCTTATTGG TACCCGAGGA TCAATGTAAG CAGCATTTAA GCACCTTAGC GGCCATGGCT GAAAAACTAT CGGACAAACA CATTTTAAAA CAGCTGCGTA AAACCCAAGA TGCAGCCGAA CTTTACCAGG TAATAACTCA ATGA
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Protein sequence | MELCSILQPE CTTCATPGSK KKVLELISEL VAAQYPPLSA QAVFESLVAR EKMGSTGIGN GIAIPHGRLD NITQPIGVFI KCDEAIAFDA IDKQPVDLLF ALLVPEDQCK QHLSTLAAMA EKLSDKHILK QLRKTQDAAE LYQVITQ
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