| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0484 |
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| Symbol | uvrD |
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| ID | 4017774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 556553 |
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| End bp | 558721 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954470 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_561499 |
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| Protein GI | 91791848 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTAT CAAGATTACT AGACGGCTTA AATGATGAAC AGCGTGAAGC CGTAGGCGCA
CCACTATCGA ACATGTTAGT GCTCGCTGGC GCAGGCAGTG GTAAAACCCG TGTATTAACC
CATAGAATTG CTTGGTTAAT GCAGGTTGAA CAGCAAAGCC CCTACTCCAT CTTAGCCGTG
ACCTTCACCA ATAAAGCCGC TGCAGAAATG CGCGAGCGCG TTGAAAAAGT GGCAGGCTCT
AACATGGGCC GCATGTGGAT AGGTACCTTC CATGGCCTAG CCCATCGTCT ACTGCGGACC
CATTTCCAAG ATGCTAACCT GCCCCAAAGC TTTCAAATAA TCGACTCTGA CGATCAGCTT
CGCTTACTTA AGCGCATTTT AAAAAGCCTA AACCTCGACG AAAAACAATA TCCACCCCGT
CAAGCCCAAG GCTATATCAA TGGCAAGAAA GACCAAGGAC TGCGCCCTAA GCATATCGAT
GCTGGCGGTT TCCCCATTGA ACAAAACCTG CTAAATATCT ATAAAGTTTA CCAAGAGTCT
TGCGATCGCG CGGGCTTAGT AGACTTTGCT GAAATCCTCT TGCGTGCCCA CGAGCTGTGG
CTCAATAAAC CCCATTTACT GGCGCACTAC CAAGAACGCT TCAAACACAT CTTAGTGGAC
GAGTTCCAAG ACACTAACGC CATTCAGTAT GCGTGGATCC GTGTATTGGC AGGTAACAGT
GCTAATGTGA TGATAGTGGG TGATGACGAT CAGTCCATCT ACGGCTGGCG TGGCGCTCAG
GTTGAAAATC TACACAAGTT CCTACAAGAC TTTCCAGGTT CTAGCACCAT ACGCTTGGAA
CAAAATTACC GTTCTAGCGC CAATATTCTG AATGCATCCA ACGAATTAAT TGCCAATAAC
CCAGACAGGT TAGGCAAAAA GTTGTGGACC GAAGATAAAG ACGGCGAACC CATTTCCATT
TATTGTGCCT TTAATGAAAT GGACGAGGCC CGTTATATCG TTAGCCGTAT CCAAGACTGG
CAAGAAAAAG GCGGCGCCTT AACTGATTGT GCTATTCTCT ACCGTTCAAA TGCCCAATCT
CGGGTATTGG AAGAAGCTTT CTTACACAAG GGCATGGCTT ACCGTATTTA TGGTGGTCTG
CGCTTCTTCG AACGCCAAGA AATCAAAGAC GCCATGGGTT ACATGCGTCT TATCAATAAT
CATAATGATG ATGCAGCCTT TGAGCGTATC GTTAACACCC CCACTCGCGG GATTGGTGAT
CGCACCTTAG ATATTATGCG CACCACCGCC AGACAACACC AGCTCACCCT ATGGCAAGCG
AGTTTACGTT TGTTGGAAGA GAAAGTCTTA GCGGGTCGTG CGGCCAATGC GGTGCGCGGC
TTTATGGACT TAATCGTTGA CCTTAAAGTC GACACAGAAG CAATGCAGCT GTTCACTATG
GTCGATACTG TAGTGAATAC TTCTGGCCTT AGAAGCATGT ATCAAGCCGA AAAAGGCGAG
AAAGCCCAAT CTAGGATCGA GAACTTAAAC GAACTCGTGA CGGCGGCCCG CAGCTTTGAA
ATGCCAGAAG AACTTGAAGA CATGGGCGAG CTCAATGCCT TCTTGTCCCA CGCCGCGTTA
GAAGCGGGTG AAGGTCAAGC CGATGCTTTC ACTGATGCGG TACAGTTGAT GACACTGCAT
TCTGCCAAGG GACTCGAGTT TCCCATGGTG TTTATGGCTG GCGTCGAAGA GGGAATATTC
CCCAGTAAAA TGGCGTTGGA TGAAGGCGAT AGACTCGACG AAGAACGTCG CCTTTGTTAT
GTGGGCATGA CCCGCGCCAT GGAAAAATTG ACCATTAGTT ACGCCGAATC ACGACGCATT
TATGGTCGTG AAGATTACGC AAGTCCATCA CGCTTCATTG GCGAAATTCC CGCTAAATAT
GTTGAAGAAA TTCGCCTTCG GGCAAAGGTA ACAACCCCAA CCATGAGTTC TAAAATTAGC
AAACCAAGAG CCACCATAGC CCAAGACACA GGCTTTAAAA TAGGTCAAAC GGTTAAGCAC
TTTAAATTCG GCCAAGGCGA TATCACCAGC TTTGAAGGCA TGGGGGATAA AGCTAGGGTT
CAAGTAAACT TCACCGATGT AGGCAGTAAA TGGCTGCTGG TCACACTTGC CAAGCTTGAG
GCCTGTTAA
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| Protein sequence | MDVSRLLDGL NDEQREAVGA PLSNMLVLAG AGSGKTRVLT HRIAWLMQVE QQSPYSILAV
TFTNKAAAEM RERVEKVAGS NMGRMWIGTF HGLAHRLLRT HFQDANLPQS FQIIDSDDQL
RLLKRILKSL NLDEKQYPPR QAQGYINGKK DQGLRPKHID AGGFPIEQNL LNIYKVYQES
CDRAGLVDFA EILLRAHELW LNKPHLLAHY QERFKHILVD EFQDTNAIQY AWIRVLAGNS
ANVMIVGDDD QSIYGWRGAQ VENLHKFLQD FPGSSTIRLE QNYRSSANIL NASNELIANN
PDRLGKKLWT EDKDGEPISI YCAFNEMDEA RYIVSRIQDW QEKGGALTDC AILYRSNAQS
RVLEEAFLHK GMAYRIYGGL RFFERQEIKD AMGYMRLINN HNDDAAFERI VNTPTRGIGD
RTLDIMRTTA RQHQLTLWQA SLRLLEEKVL AGRAANAVRG FMDLIVDLKV DTEAMQLFTM
VDTVVNTSGL RSMYQAEKGE KAQSRIENLN ELVTAARSFE MPEELEDMGE LNAFLSHAAL
EAGEGQADAF TDAVQLMTLH SAKGLEFPMV FMAGVEEGIF PSKMALDEGD RLDEERRLCY
VGMTRAMEKL TISYAESRRI YGREDYASPS RFIGEIPAKY VEEIRLRAKV TTPTMSSKIS
KPRATIAQDT GFKIGQTVKH FKFGQGDITS FEGMGDKARV QVNFTDVGSK WLLVTLAKLE
AC
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