Gene Sden_0481 details

Gene Information

• Locus tag: Sden_0481
• ID: 4016664
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 553997
• End bp: 554575
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637954467
• Product: ATP-dependent protease La
• Protein accession: YP_561496
• Protein GI: 91791845
• COG category: [R] General function prediction only
• COG ID: [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACAA CAGAAATGGC ATTACTGGTT CAAGATGCTG TCTTGCTGCC CGATGGCCGT 
ATTGAAGTGC GTATCGCCTC CCCAAGCCAG CTCTCCATGA TTGCTAATGT ATTCAAGGGC 
CAATACCCCT TGGCCTTCGC AGCCGCCAAA GCCCACAGTC CACTGCCTTG TTATGTTACT 
GCTACCCAGT GCGACATTAT TGATTTTAAT CAACTGGAAG ATGACTCCCT TAGCATAGTG 
CTCGAGGGTA GGCAGAGGGT GAAGATATTA TCGGCGGCGC AGCAACGTAA CCAGATATGG 
ATTGCCAGAA CCTTACCTTG TGCGAATTGG CGCAATGAAC CTATTGCCGG TGAATTTGAA 
ATCATCAGTG CGGCACTGGA ACAATTCTAT GAGGTGAATC CCGATCTCTT GGGCTTATAC 
AGCCAGACAC ACCTTGAAGA TGCCACTTGG GTGAGCCAGC GTTGGTTAGA GGTCTTGCCC 
ATGTACAATA AAGATAAGTT GATTTTGGTG GAGCAGCCCA ACTGCCATAA GACGATGAAC 
TTTGTACTGC AATTGCTTAA GTCTCATGTA GGGGCTTAG 

 

Protein sequence

MKTTEMALLV QDAVLLPDGR IEVRIASPSQ LSMIANVFKG QYPLAFAAAK AHSPLPCYVT 
ATQCDIIDFN QLEDDSLSIV LEGRQRVKIL SAAQQRNQIW IARTLPCANW RNEPIAGEFE 
IISAALEQFY EVNPDLLGLY SQTHLEDATW VSQRWLEVLP MYNKDKLILV EQPNCHKTMN 
FVLQLLKSHV GA