Gene Sden_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0478 
Symbol 
ID4016661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp550984 
End bp551904 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content47% 
IMG OID637954464 
Productputative manganese-dependent inorganic pyrophosphatase 
Protein accessionYP_561493 
Protein GI91791842 
COG category[C] Energy production and conversion 
COG ID[COG1227] Inorganic pyrophosphatase/exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATGT ATGTAGTGGG TCACAAGATC CCAGATTCTG ATTCAATTTG TGGCGCCATC 
GCCCTAGCTT ACTTAAAGAA CCAAATCGAC GAGCCAGCCA TTGCTGCACG TCTTGGTGAA
CTGTCCCCTG AAACTGCCTT TATTCTCGAG CGCTTTGGCT TTGAAGCACC GCTTTTTAAA
GAAAGCTACG CTGGCGAAGA AGTCTATATT GTCGACCATT CAGAGTTAAC CCAAGCCCCT
GATGACATAG CCGAAGCCAC AATTGTGGGT ATTGTCGATC ACCACAAGTT AGGTGATTTA
ACGACGTCTA CGCCGCTTGA ATGCTGGATC CGCCCAGTGG GTTGCAGCAA CACTGTCATT
AAAATGATGT ATGACTTCTA CAAGGTCGAC ATTCCAGCCG ATATCGCAGG CATCATGATG
TGCGCCATTT TAAGTGATAC TGTGATATTC AAATCACCAA CTTGCACCAC GGCTGACATT
CGCTGCGTCG AAGCACTAGC TGAAATCGCC GGCATTGAAG ACTTTAAAGC ACTGGGCATG
GAAATGTTCA AGGTTAAGTC TGCCGTTGAA GGCACGCCGG CGCGCGACTT AGTCATGCGT
GACTTTAAAG ACTTCAATAT GAATGGCAAT CTAGTGGGCA TAGGCCAACT TGAAGTCATC
GACTTAGCGG TATTTGATGC CATCAAAGCC GATTTAGAGG CAGATATCAA AGCCCTGAAA
CAAGAAGGTA AGCGCCATAG TGTATTGTTA TTGCTCACAG ACATTATGAA AGAAGGCTCA
GAAATGTTAG TCATCAGTGA TGACAGCGAG CTGACTAAAA AAGCCTATGG CAAAGCCACT
GTCGATGGCA AAGTGTGGCT AGATGGCGTA CTTAGCCGCA AGAAACAAGT GGTGCCTCAG
CTGCAAAAAG CCTTCGCTTA A
 
Protein sequence
MPMYVVGHKI PDSDSICGAI ALAYLKNQID EPAIAARLGE LSPETAFILE RFGFEAPLFK 
ESYAGEEVYI VDHSELTQAP DDIAEATIVG IVDHHKLGDL TTSTPLECWI RPVGCSNTVI
KMMYDFYKVD IPADIAGIMM CAILSDTVIF KSPTCTTADI RCVEALAEIA GIEDFKALGM
EMFKVKSAVE GTPARDLVMR DFKDFNMNGN LVGIGQLEVI DLAVFDAIKA DLEADIKALK
QEGKRHSVLL LLTDIMKEGS EMLVISDDSE LTKKAYGKAT VDGKVWLDGV LSRKKQVVPQ
LQKAFA