Gene Sden_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0457 
Symbol 
ID4017228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp527498 
End bp527896 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content49% 
IMG OID637954443 
Producttwin-arginine translocation protein TatB 
Protein accessionYP_561472 
Protein GI91791821 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGACG GTATCGGCTT TATGGAGTTG CTGCTGATCG GTATTTTGGG GCTTGTGGTT 
CTCGGCCCCG AAAGGCTACC GGTTGCAGTA CGTAGTGTGA CGGGTTGGAT CCGCGCCTTA 
AAACGCATGG CTAACTCAGT CAAAGATGAG CTTGAGCAAG AGCTTAAAAT TGAACAGTTG 
CATGCGGATT TAAAGAAAGC CGAAAGCAAA GGCTTAGCGA ATTTATCCCC TGAGCTGCAG 
GAGTCTATCG ATCAGCTTAA ACAGGCTGCC CAGTCGGTGA ATCGCCCCTA TCAGCTAGAT 
GAATCGAATG AGCAAGAACC TAAGATAGCA CCGCCTCAGG CAAACATAGC CGAGACTCCC 
ACTCAATCTG GCGATACTCA CTCGAAAAAC AACGGATAA
 
Protein sequence
MFDGIGFMEL LLIGILGLVV LGPERLPVAV RSVTGWIRAL KRMANSVKDE LEQELKIEQL 
HADLKKAESK GLANLSPELQ ESIDQLKQAA QSVNRPYQLD ESNEQEPKIA PPQANIAETP 
TQSGDTHSKN NG