| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0456 |
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| Symbol | |
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| ID | 4017227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 526709 |
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| End bp | 527494 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954442 |
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| Product | Sec-independent protein translocase TatC |
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| Protein accession | YP_561471 |
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| Protein GI | 91791820 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCAAC AGTTGCCACT CATCAGCCAT TTACTTGAGC TGCGCACCAA ACTACTCAAA
GCCATCGCCA GCGTATTACT GGTGTTCATT GCCAGCGTGT ATTGGGCTAA TGATATTTAC
CATTATGTGG CCATCCCCTT AATGGAGTCA TTACCTGAAA ATGGCAGCAT GATAGCCACA
GATGTCGCCG CGCCCTTCTT CGCGCCGTTT AAATTAACGC TGATTTTATC CTTTTTCTTA
GCAATTCCCT ACGTGCTGTA CCAAATCTGG TCTTTCGTGG CACCAGGACT TTATAAACAT
GAAAAACGCT TGGTCATGCC GCTACTCTTG AGCAGCACCT TGTTATTTTA TGCTGGCATT
GCCTTTGCGT ATTACATTGT TTTCCCTGTA GTGTTTGGTT TTTTTGCCAG CGCAGCCCCA
GAAGGGGTGC AAGTGGCTAC CGATATCAGT AGCTATTTAG ACTTTATATT AAAACTGTTT
TTTGCATTCG GCCTCGCATT TGAAATCCCA GTCGCCGTGG TATTACTCTG CTGGGCCGGC
GTCACCACTC CCGAAGATTT GCAGACAAAA CGCCCTTACA TAGTGGTTGG CGCCTTCGTT
ATCGGCATGC TATTAACGCC GCCAGATATC ATCTCCCAGA CTATGCTTGC GGTGCCAATG
CTGCTATTGT TCGAAGCGGG CTTGTTTGCC GCTAAATTTT ATCGCAACAA TGCCGATGAT
AATCAGCGGG ATACTACAGA TATCCCCAAG GATGAAGACA GCAGCGATAA AGACGTAACT
AAATAA
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| Protein sequence | MSQQLPLISH LLELRTKLLK AIASVLLVFI ASVYWANDIY HYVAIPLMES LPENGSMIAT
DVAAPFFAPF KLTLILSFFL AIPYVLYQIW SFVAPGLYKH EKRLVMPLLL SSTLLFYAGI
AFAYYIVFPV VFGFFASAAP EGVQVATDIS SYLDFILKLF FAFGLAFEIP VAVVLLCWAG
VTTPEDLQTK RPYIVVGAFV IGMLLTPPDI ISQTMLAVPM LLLFEAGLFA AKFYRNNADD
NQRDTTDIPK DEDSSDKDVT K
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