| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0437 |
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| Symbol | |
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| ID | 4017971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 506724 |
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| End bp | 509012 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637954423 |
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| Product | transcriptional regulatory protein-like protein |
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| Protein accession | YP_561452 |
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| Protein GI | 91791801 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000809247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAGC AATATTCGAT TGGTGGTTTT TTTATTGATT TATCCAGAAA TCAAATCACG
CAAAATAACC AATCTCAAAT AATTGCTCCA AAAGCCTTGG CAGTACTCAC TTACTTGGCT
GAAAACCAAG GTAAGGTGGT TAGTCATGAC GCATTGCTGG AGAACGTCTG GCAAGGCACT
GTCGTTTCAC CTAATACATT ACAAAGAAGC ATCGCCCAAT TAAGAAAAGC CCTAGGTGAT
GATGGCAAAG TTCAGGTTTA TATTAAGACC CATGCAAAGC AAGGTTATAG CCTTGAATGT
GATGTTAGGT GGCACGATAA TATTGAATCC CCTCCCCTCA ATGCCGCTCA AGAAAATATT
GTCGACACGC CGACTATGAG TGAGACCAAC GCCCTTGCTA TGAGTGAGGA CAACACGCAA
AGCAAGGCGC AACATCACTC TCACGACAAG GATCAAAGTA AGAGCGCCAC AACAACCGAT
AACGCCAAGC CTTCAAAGCT GACTGTAATG CCGCTGTTTA CCCTCTTTGG CATAATTATC
TTGGCGTATA TCGGCTATCA GTATCTTATG CCTCAGCCGC CCTCGAAATT ATCCTTTGGC
GAGTTACGTC TACTGACCAC CACAGACAAT AAAGAATTCG CGAGCATTTA TTCACCCGAT
GGTCAGTACG TGGTTTTTCA TCGCTATTCA GCAGTGTTTT GCCGCAATAA CATCTGGGCA
AAAAACACTA AGACTCAGCA AGAAACTCAA CTAACCAAAG ACTTTGATTC ATATGGAAGT
CATAGTTTTT CTACCGATGG TAACCAACTG GTCTTTATTC AGACGGGGGG TTGTAGTAAA
CCTGAGCCCG ATAATCAGTG TTATAAGCTC ATGAGTTTGG ATTTTCACAA GGCACTGCAA
GCACCTCAAT CGGCAAAGGT ATTGGTTGAG TGTAAAAATT CAGAAATAAA ATTTCCTAAA
TGGCTAAATA ATGACGATAT CGCCTTATTT CAAAAGCTGT CTAATCGTTG GAAATTGACC
CGTTACTCGG TCAGTGCAAA CAAAACCACA GATATTTACG AGATTGATGA GGGAAATTTA
ATTTACTACG ATTATTCGCC AGAAGATGAA CTGCTTGCCG TGATAAGTTC CCATAAAGAT
GGTCAGTATT ACATTGAAAT TCTCAAACCA GATGGCCGTC TTATTTCCAG CAACCGCATC
GAATACCCAA AAGAAATCGC AAAATTTAAG AGGATCTACC CCAATTTCTC CCCCTTAAAG
GAACAACTCA TTTTTAGCAC CGGCAGGCAA TTATTTACCC TGTCTTTTGA TGGCCAAGTC
ACTAACATCA GCTTGCCCCT CGATCAATCT ATGGGCCAGC CCCAGTTTCA TCCTGATGGA
AAGCGTATGC TGGTCATTAA AGGCCACTAC GACAGTGACA TAGTATCTTT GCCACTCTCA
CAGTTAACGA GTTCCCCGCT AGTGAGCTCA CAGCCCAATA CCGCGCAGAT TGAAAATGCA
CAAATAGTAC AATCATCGGC GCAAACTCAA AGCCTTACAA GCAGCGATTA TTCAGTAATA
GAGCGCTCAA CATATGGCGA AGATAGCGCC AAATTACAGC CCAATGGCGA GCTAATCGCA
TACCAATCGG ATCGTTCAGG AGAAGAGCAA CTTTGGATAA CCGACGGTAA AAGTTCACAG
CAACTCACCG ACTTCCCGAT GGATACGTAT ATATATGGCA TGGATTGGGC GGCTGACGGC
CAAAGTCTTT TAGTCAATGC TAACGATGTG CTCATTCAGG TATCTCTGGA TTCAACGCAA
ACGATTTTTC CATTGGAATA CCCTGTGTTT CAACTTTTCC AATGGGACAG TAAAAACAAC
CGCGCTGTGG TGCTTATTCG TATTCAAGAG GTACTCACAT TCGCCGAGCT TAATTTAACC
CACTTAGAGA CTCGAACCAT TAACGACAAG GACATTAATT GGGCGCTTAA AAGTGAAAAT
GGCCAACTGG TTTACGCGGA TAAGATGGGC AGGTTTTGGC GCCCAGGGCC AGTTGAAGAT
CAACGGATTG AAGCACTCGA TGGCCAAGAA GCCGAAAAGC AGCGCTTCGT GATAAATGAC
AATGTCATTT ACGGCATTAA TAAACAAAAC CAATTGTGGT CCTATGGGCT TAACGAGGAT
AAATTTGACA TCCTTGCAGA CTTACCCAGC AATGTCGATT ATTTAACCGA CATAGATAAC
AGCCAGCTTT TGATGAGCAT CCGCGTTTCC GCCAGAAAAG ACGTAGCTGA ACTCACCATA
AAACAGTAG
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| Protein sequence | MAEQYSIGGF FIDLSRNQIT QNNQSQIIAP KALAVLTYLA ENQGKVVSHD ALLENVWQGT
VVSPNTLQRS IAQLRKALGD DGKVQVYIKT HAKQGYSLEC DVRWHDNIES PPLNAAQENI
VDTPTMSETN ALAMSEDNTQ SKAQHHSHDK DQSKSATTTD NAKPSKLTVM PLFTLFGIII
LAYIGYQYLM PQPPSKLSFG ELRLLTTTDN KEFASIYSPD GQYVVFHRYS AVFCRNNIWA
KNTKTQQETQ LTKDFDSYGS HSFSTDGNQL VFIQTGGCSK PEPDNQCYKL MSLDFHKALQ
APQSAKVLVE CKNSEIKFPK WLNNDDIALF QKLSNRWKLT RYSVSANKTT DIYEIDEGNL
IYYDYSPEDE LLAVISSHKD GQYYIEILKP DGRLISSNRI EYPKEIAKFK RIYPNFSPLK
EQLIFSTGRQ LFTLSFDGQV TNISLPLDQS MGQPQFHPDG KRMLVIKGHY DSDIVSLPLS
QLTSSPLVSS QPNTAQIENA QIVQSSAQTQ SLTSSDYSVI ERSTYGEDSA KLQPNGELIA
YQSDRSGEEQ LWITDGKSSQ QLTDFPMDTY IYGMDWAADG QSLLVNANDV LIQVSLDSTQ
TIFPLEYPVF QLFQWDSKNN RAVVLIRIQE VLTFAELNLT HLETRTINDK DINWALKSEN
GQLVYADKMG RFWRPGPVED QRIEALDGQE AEKQRFVIND NVIYGINKQN QLWSYGLNED
KFDILADLPS NVDYLTDIDN SQLLMSIRVS ARKDVAELTI KQ
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