| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0422 |
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| Symbol | groEL |
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| ID | 4017844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 493528 |
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| End bp | 495165 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954409 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_561438 |
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| Protein GI | 91791787 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00454013 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCTA AAGAAGTAAA GTTTGGTAAT GACGCTCGCG TAAAAATGCT TGCAGGCGTA
AACATCCTAG CTAACGCAGT AAAAGTCACC TTAGGCCCTA AAGGTCGTAA CGTAGTATTA
GACAAGAGCT TTGGCTCTCC AGTCATCACC AAAGACGGTG TATCTGTTGC ACGTGAAATT
GAACTTGAAG ACAAGTTTGA AAACATGGGC GCACAAATGG TGAAAGAAGT TGCTTCTAAA
GCCAACGATG CCGCCGGTGA CGGTACCACG ACTGCAACCG TATTGGCCCA GTCTATCGTA
GTCGAAGGCC TAAAAGCCGT AGCTGCGGGC ATGAACCCAA TGGATCTTAA GCGCGGTATC
GACAAAGCGG TTATCGCTGC GGTTGCCGAA CTTAAAAAGC TATCACAAGA ATGTTCTGAC
ACTAAGGCTA TTGCCCAAGT CGGTACAATT TCAGCTAACT CTGATGAGTC AATCGGCGAA
ATCATTGCTA CCGCAATGGA AAAAGTCGGT AAAGAAGGCG TTATCACAGT TGAAGAAGGC
CAAGCACTAG AAAACGAGCT AGAAGTCGTT GAAGGTATGC AGTTTGACCG TGGTTACTTG
TCTCCATACT TCATCAATAA GCCAGAGACT GGCAGCATTG AATTAGACAG CCCATTCATT
TTGTTAGTGG ATAAGAAAAT CTCTAACATC CGTGAATTAT TGCCAATCCT TGAAGGTCTA
GCTAAAACGG GTAAGCCATT GCTTATTGTT GCAGAAGACG TTGAAGGCGA AGCACTAGCA
ACCCTGGTTG TGAACAACAT GCGCGGCATC GTGAAAGTGG CAGCCGTTAA GGCACCAGGT
TTCGGTGACC GTCGTAAAGC TATGCTACAA GACGTAGCTA TCCTAACTGG CGGTACTGTT
ATCGCTGAAG AAATCGGTCT AGAGCTTGAA AAAGCCACCC TAGAAGATTT AGGTACAGCT
AAGCGCGTTG TTATCACTAA AGACAACACC ACCATCATCG ACGGTAGCGG TGAGCACACT
CAGATCACTT CACGTGTTGC GCAAATCAAG CAGCAGATGG AAGACTCAAG CTCTGATTAC
GACAAAGAGA AGCTGCAAGA GCGTATGGCC AAATTGGCTG GCGGCGTTGC CGTTATCAAG
GTTGGCGCAG CCACCGAAGT TGAAATGAAA GAGAAGAAAG CTCGCGTAGA AGATGCATTG
CATGCGACTC GCGCAGCCGT TGAAGAAGGC GTAGTCCCAG GCGGCGGTGT TGCCTTAGTG
CGCGTTGCTT CTATGATTGC CGATATTGAA GTATTAAACG AAGACCAGAA GCACGGTGTG
GTTATCGCCC TTCGCGCTAT GGAAGCGCCA CTACGTCAAA TCGCCACTAA CGCAGGTCAA
GAAGCGTCAG TGGTTGCTAA CACAGTGAAG AACGGCACAG GTAACTATGG TTACAACGCC
GGTAACGACA CTTATGGTGA CATGCTAGAG ATGGGTATTT TGGACCCAAC TAAAGTGACT
CGTAGTGCAT TGCAGTTCGC CGCATCGATT GCGGGCTTGA TGATCACCAC AGAAGCTATG
ATAGCTGAAA TACCACAAGA GTCAGCGCCA GATATGGGCG GAATGGGCGG AATGGGTGGC
ATGGGCGGCA TGATGTGA
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| Protein sequence | MAAKEVKFGN DARVKMLAGV NILANAVKVT LGPKGRNVVL DKSFGSPVIT KDGVSVAREI
ELEDKFENMG AQMVKEVASK ANDAAGDGTT TATVLAQSIV VEGLKAVAAG MNPMDLKRGI
DKAVIAAVAE LKKLSQECSD TKAIAQVGTI SANSDESIGE IIATAMEKVG KEGVITVEEG
QALENELEVV EGMQFDRGYL SPYFINKPET GSIELDSPFI LLVDKKISNI RELLPILEGL
AKTGKPLLIV AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DVAILTGGTV
IAEEIGLELE KATLEDLGTA KRVVITKDNT TIIDGSGEHT QITSRVAQIK QQMEDSSSDY
DKEKLQERMA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVPGGGVALV
RVASMIADIE VLNEDQKHGV VIALRAMEAP LRQIATNAGQ EASVVANTVK NGTGNYGYNA
GNDTYGDMLE MGILDPTKVT RSALQFAASI AGLMITTEAM IAEIPQESAP DMGGMGGMGG
MGGMM
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