| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0420 |
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| Symbol | |
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| ID | 4017842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 491573 |
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| End bp | 492952 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954407 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_561436 |
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| Protein GI | 91791785 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000768677 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATA AACACGGGCT ACTGAGTGCG CCCATTGGCC GCGTACTGCT CACCATGAGC
CTACCGAACC TGCTGGGGAT TTTAACCGTG CTGGGTTTTA GCCTAGTGGA TACCTTTTTT
ATCAGTCAGT TAGGTACCGA ATCTTTAGCG GCTATCAGTT TCACCTTTCC CGTCACTTTA
GTGGTCACCA GCATTGCCAT CGGCATAGGT GCTGGAGTAT CCACCCAGCT TGGGCGTTTA
ATTGGCTCAG GTAATGCCCC CAAAGCTAAA ATATTTTTGT TCGATGCCTT AAGCCTAACT
TTATTACTCA CCAGTTTACT GGCATTAATG GCAAGCCTGC TTATTACGCC ATTATTTAGT
CTGTTAGGCG CTAATGCCGC CATCATCAGC TTGATTGAAG CATACATGCT GTTTTGGTAT
TTAGGCTGCC CACTACTGGT GCTATTAATG GTGGGGAATC AGGGTTTAAG AGCCACGGGA
GACACCAAAT CGCCGGCGAT GATCATGATG CTCGCGGCGC TGGTGAACCT AATATTAGAC
CCACTGCTTA TTTTCGGCCT TGGGCCATTC CCACGGCTTG AAATGCAAGG GGCGGCCATT
GCCAGCCTGC TCTCTTGGTT AATCGCCTGT TCACTATCCG GTTACTTATT AGTGGTGAAA
AGAAAGCTAG TGAAAATAAG CGCGGTTAAT ATCCAGCGGA TGCGCGCGCA CTGGCAGCAA
CTTGCCCATA TTGCTCAGCC TGCGGCATTA ATGAATCTTA TCAACCCTGT GGCCAATGGC
ATACTCATGG CCATGCTGGC AAGGTTGAAC CATGAGGCGG TGGCCGCCTT TGGCGCCGGC
ATTCGCCTAG AATCCTTATT GCTTATGGTG GTGATGGCAT TGTCTTCAAG CTTAATGCCC
TTTATTGCAC AAAACTTAGG TGCAGGAAAC CCCAAACGAG CCAAAGAGGC ACTGCTGTTA
AGCCTTCGAT TTATTGTTAT TTTTCAGCTA ATTGTGTACC TGCCGCTGTA CTTTTTTGCC
GCTGATATTG CTGGGCTTTT CAGTCAAGAT GCTCAAGTCA TCGAGTGGCT TAGTTTCTAC
ATCTTGGTAT TGCCACTGGC CTATGGGCCC CTAGGCATAG TCATCATAGT GGCCACCAGC
CTTAACGCTT ACCATAGGCC CATGAGTTCC TTAGTGATAA ACCTGTGCCG CCTAGTGCTT
ATCATGTTGC CCTTGGCTGC GCTGGGTTCA TACCTTGGCG GGGTGAAAGG GCTATTATTG
GCGCTGCCCA TCACCAATAC CTTAATGGGT CTTGCCTGTT ATATACTCGC CACCAAAATA
TCTGAGCCCA CAAGCTCACG CCCTAATCGG CTTGAACGAG AACAAAAATA CCGTGCCTAA
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| Protein sequence | MKDKHGLLSA PIGRVLLTMS LPNLLGILTV LGFSLVDTFF ISQLGTESLA AISFTFPVTL
VVTSIAIGIG AGVSTQLGRL IGSGNAPKAK IFLFDALSLT LLLTSLLALM ASLLITPLFS
LLGANAAIIS LIEAYMLFWY LGCPLLVLLM VGNQGLRATG DTKSPAMIMM LAALVNLILD
PLLIFGLGPF PRLEMQGAAI ASLLSWLIAC SLSGYLLVVK RKLVKISAVN IQRMRAHWQQ
LAHIAQPAAL MNLINPVANG ILMAMLARLN HEAVAAFGAG IRLESLLLMV VMALSSSLMP
FIAQNLGAGN PKRAKEALLL SLRFIVIFQL IVYLPLYFFA ADIAGLFSQD AQVIEWLSFY
ILVLPLAYGP LGIVIIVATS LNAYHRPMSS LVINLCRLVL IMLPLAALGS YLGGVKGLLL
ALPITNTLMG LACYILATKI SEPTSSRPNR LEREQKYRA
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