Gene Sden_0418 details

Gene Information

• Locus tag: Sden_0418
• ID: 4017840
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 490338
• End bp: 490991
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637954405
• Product: FxsA cytoplasmic membrane protein
• Protein accession: YP_561434
• Protein GI: 91791783
• COG category: [R] General function prediction only
• COG ID: [COG3030] Protein affecting phage T7 exclusion by the F plasmid

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0000190293
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTATTA TTCTATTTTT ATTGTTTGTA TTGATCCCCG TGGTCGAATT GTCAGTGCTG 
ATTGAAGTCG GTGACTCCAT TGGTGCATTA AGCACAGTGG CGTTGGTGTT CTTGACCGCC 
ATCGTCGGGG TGTCATTAGT GCGCAGCCAA GGGTTAAGCA CCATGATGCA AGTGCAGCAG 
AAGCTTGCTC GCGGTGAAGC ACCGGGCAAA GAAATTGTCG AAGGTATGAT GTTAGCGGCT 
GCCGGTGTAT TGCTGTTAAT CCCAGGTTTT GTCACCGATT TTATTGGGCT ATTACTGCTA 
ACGCCGTTTA CCCGCTCACC CATAGCCGGA TTTTTATTTA AGCGTATGCA GCTTAAAGTG 
AAAACCCGTG GGGCAGGTTT TGGCGCGCAT TTTAACGGTC AACAAGGCCC AGGTGCGGGA 
CGCTCACCTT TCGATGCTGG CAATGTGTTC GATGCCGATT TTGAACGCAA AGACGAACCC 
ACACCCCGCA GTCACCACAT TGAAACCAAT GTCGTCGACC CAAGCCGTGC TGAGAAAGAC 
ATCACTCCAG AGCAAAACCC TAAAGCGAAT ACTGAAAAAA GCGCTGAAGA TAATGCTGAA 
GAAAGTACAA CTGATAGTGC TAAAGCGGAC CAGCCAAAGG CACCGAACCC ATAA 

 

Protein sequence

MFIILFLLFV LIPVVELSVL IEVGDSIGAL STVALVFLTA IVGVSLVRSQ GLSTMMQVQQ 
KLARGEAPGK EIVEGMMLAA AGVLLLIPGF VTDFIGLLLL TPFTRSPIAG FLFKRMQLKV 
KTRGAGFGAH FNGQQGPGAG RSPFDAGNVF DADFERKDEP TPRSHHIETN VVDPSRAEKD 
ITPEQNPKAN TEKSAEDNAE ESTTDSAKAD QPKAPNP