| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0404 |
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| Symbol | |
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| ID | 4017150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 469806 |
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| End bp | 470945 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637954387 |
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| Product | Serine--pyruvate transaminase |
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| Protein accession | YP_561420 |
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| Protein GI | 91791769 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATCAG CCCCTACAGT CAATTCATTT ACCCCGCCGC GCCGTACCTT GATGGGTCCG
GGTCCTTCTG ATGTGTATCC TGAAGTGCTG GCTGCCCAAG CTAGGCCGAC CATAGGGCAT
TTAGATCCTC TGTTTGTCGG CATGATGGAT GAGCTTAAAA GCTTAATTCA ATACGCGTTT
CAGACTAAAA ATGAAATGAC CTTAGCGATT TCTGCCCCAG GGAGCGCTGG GATGGAAGCC
TGCTTTGTGA ATCTGGTTGA GCCGGGCGAG AAAGTGATTG TGTGCCGCAA TGGCGTATTT
GGCGAGCGTA TGCGGCAAAA TGTTGAGCGT GTCGGCGCCC TTGCTGTGGT GGTGGATAAT
GAATGGGGCG AGCCTGTGTG CCCAAAAGCG GTGGAAGCGG CGCTTAAGGC CAATCCCGAT
GCAAAGTTTT TAGCTTTTGT TCATGCAGAA ACCTCAACAG GGGCGTTATC GGATGCCAAA
ACCCTATGCC GCTTAGCCCA AGAGCATGAT TGCCTTAGCA TAGTGGATGC GGTGACCTCA
TTAGGCGGTG TTGAGCTTTT AGTGGATGAG TGGGGCATAG ATGCCATCTA TTCTGGCAGT
CAGAAGTGCT TGTCTTGTGT ACCGGGTTTA TCGCCAGTGT CGTTCTCGCC CAAGGCGGTG
GCTAAGCTCA TGAGCCGTAA AACCCCAGTG CAGAGCTGGT TTTTAGATCA ATCCTTAGTC
ATGGGCTATT GGGGTAATAA AGACAGCGGG CTTAAGCGCA GTTACCATCA TACAGCGCCT
GTGAATGCAC TGTATGCCTT GCATGAAGCA TTTCGTTTAT TGGCTTTAGA AGGTTTAGAG
AATGCTTGGG CAAGGCATAA AAAAATGCAC CTAGTCTTAG CCGCTGGGCT TGAGCAATTA
GGGCTTAAGT TTGTCGTAGC AGCGGAGCAC AGGTTGCCTC AGCTCAATGC CGTGTATTTA
CCTCAAGGCG TCGATGATGC CTTAGTCCGC ACTCAGTTAC TCGAAGAATA CAATTTAGAA
ATTGGTGCAG GCCTTGGGGC GTTAGCGGGT AAAGCGTGGC GCATAGGCTT GATGGGCTTT
GGCGCCCGCC GTGAAAACGT GGCCTTGTGT TTAAAAGCGC TGGAAGAGGT GATGAACTAA
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| Protein sequence | MISAPTVNSF TPPRRTLMGP GPSDVYPEVL AAQARPTIGH LDPLFVGMMD ELKSLIQYAF
QTKNEMTLAI SAPGSAGMEA CFVNLVEPGE KVIVCRNGVF GERMRQNVER VGALAVVVDN
EWGEPVCPKA VEAALKANPD AKFLAFVHAE TSTGALSDAK TLCRLAQEHD CLSIVDAVTS
LGGVELLVDE WGIDAIYSGS QKCLSCVPGL SPVSFSPKAV AKLMSRKTPV QSWFLDQSLV
MGYWGNKDSG LKRSYHHTAP VNALYALHEA FRLLALEGLE NAWARHKKMH LVLAAGLEQL
GLKFVVAAEH RLPQLNAVYL PQGVDDALVR TQLLEEYNLE IGAGLGALAG KAWRIGLMGF
GARRENVALC LKALEEVMN
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