Gene Sden_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0400 
Symbol 
ID4017146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp466554 
End bp467162 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content37% 
IMG OID637954384 
ProductAbi-like protein 
Protein accessionYP_561417 
Protein GI91791766 
COG category[V] Defense mechanisms 
COG ID[COG4823] Abortive infection bacteriophage resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCAG CACTTATTCC TTACATTAAA CCCTATCAAG AAAGTAAAGA GCTTTGTGAG 
AGGTTGGCTA AACAAGGGCT GAAAATCGAA GATCAAAATG AAGCAGAAAA AATCATAAAG 
CGCTATAGTT ACTATCGCTT CAAAGCGTAC CTTATCCCCT TTAAGAACAA CAATACAAAA 
ACTTATAACG AAGGCTCTAC TTTCGAAAAC AGCCATTTAC TATACCAATT CGATTGTGAG 
TTACGAAGCA CATTATTTCA AATTATAGAG AAGATTGAAG TTGGTGTTCG TTCATCCGTC 
GACCAATGGA TTACATCTCA AACCAATAAT CCTTTTTGGT ATTTAGACTC ATCCCTTTTT 
AGTCATAATG GTGATCAAAT CAAAACTGTG TCCCGTGTCA GGGATAGTTT TAAGGACTCA 
AAAGAAGAGT TTGCCAAGCA TTATAGAGAA AAGTACTACA ATCAATATTG CCCATTTTAT 
CGTGATCTTC CACCTGCATG GGTTGCCATC GAGATAATGA CGTTTGGTAA CGTAGTTAAG 
TTACTGGAAA ATATTACTGA AGCCCGAATT CAACTCCGAA GTGCGACACT CACCAAATTA 
AGCGGCTAA
 
Protein sequence
MAPALIPYIK PYQESKELCE RLAKQGLKIE DQNEAEKIIK RYSYYRFKAY LIPFKNNNTK 
TYNEGSTFEN SHLLYQFDCE LRSTLFQIIE KIEVGVRSSV DQWITSQTNN PFWYLDSSLF 
SHNGDQIKTV SRVRDSFKDS KEEFAKHYRE KYYNQYCPFY RDLPPAWVAI EIMTFGNVVK 
LLENITEARI QLRSATLTKL SG