| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0393 |
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| Symbol | |
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| ID | 4017527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 461274 |
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| End bp | 462239 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954378 |
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| Product | tyrosine recombinase XerC |
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| Protein accession | YP_561411 |
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| Protein GI | 91791760 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAA CAAGCTTATT TGCGCGCTTT GAACGCTACT TAACTTCAGA GCGGCAGTTA
TCGCCTTATA CTGTGCGTAA TTATCTGTTT GAATTACGCA GAGCCGAGCC GTATTTATTT
ACAACACTTA GTTTGCCTGA ATATGCGGCA CAAACCTCGC AAACCAATGC AATAACGTCT
CCGCAAACGG ATGAGCAGTG GTTAGCATTA AGCCATGAGG CGCTGCAAGC TCTGCTGGCA
AAACTTCACC GCCAAGGCTT AAGTCCTCGC TCACTTTCCC TGTGTTTATC TGCCTTAAAG
CAATTTTTTG AATACCTGTT GGCAGAAGAC TGCATCACTC ATAACCCGGC TAAAGGCTTG
TCTGCGCCTA AACAAGCCAA ACCTTTACCT AAGAATATCG ATGTGGATGC CATCAGCCAT
TTATTGGCAA TAGATGGCGA TGATCCCCTG GTTATACGAG ATAGGGCCAT CATGGAGTTG
TTTTATTCCA GCGGCCTGCG CCTCGGGGAG TTGGCCAGTC TAAATTACGG CGATATTCAC
TTGGGGTTAC AAGAAGTAAA AGTGCTGGGT AAAGGTGGGA AAGAGCGGCG CGTGCCGGTA
GGAAAGCTCG CCATGGAGGC GCTGGCCTTA TGGCACACTC AAAGGTTATT GCTAGTGCAA
GCTGATGAGC CAGCCTTGTT TGTCAGTAAC CAGGGCAAGC GCCTATCTCA TCGTAGTATT
CAAGCCAGAA TGGCTAAATG GGGTCAAAAT CAGGCCTTAT CCGTACCGGT TCATCCTCAT
AAGTTGCGTC ATTCCTTCGC GACACATATG CTTGAATCGA GTGGGGATTT GCGCGCGGTG
CAAGAATTAC TCGGGCATGC CAATTTATCC ACCACCCAAA TTTACACGAG TTTGGATTTT
CAACATCTTG CTAAGGTCTA TGATGGTGCG CACCCAAGGG CGAAAAAAGG GAGGGAGAAA
GGATGA
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| Protein sequence | MAQTSLFARF ERYLTSERQL SPYTVRNYLF ELRRAEPYLF TTLSLPEYAA QTSQTNAITS
PQTDEQWLAL SHEALQALLA KLHRQGLSPR SLSLCLSALK QFFEYLLAED CITHNPAKGL
SAPKQAKPLP KNIDVDAISH LLAIDGDDPL VIRDRAIMEL FYSSGLRLGE LASLNYGDIH
LGLQEVKVLG KGGKERRVPV GKLAMEALAL WHTQRLLLVQ ADEPALFVSN QGKRLSHRSI
QARMAKWGQN QALSVPVHPH KLRHSFATHM LESSGDLRAV QELLGHANLS TTQIYTSLDF
QHLAKVYDGA HPRAKKGREK G
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