Gene Sden_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0380 
Symbol 
ID4017514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp434295 
End bp434900 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content44% 
IMG OID637954365 
ProductOmpA/MotB 
Protein accessionYP_561398 
Protein GI91791747 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TACTAGTATT ACTCATGCTT GCACTAAGCA CAGGCTGCTC GATGAATGAT 
ATCAGTTCGA TGGACAGCCC TACAGAGCAA AAATTTGATC TCAACGATCA AGACAGAGAC 
GGTGTCATAG TCGCCCGTGA ACGCTGCCCA GAAACGTTAT CGGGGGCCAC TATTAGCAAC 
TATGGTTGTG GCCAAATTAA GCCAATTCAT GAACGCCAGG AGCTTAAAAT CTTGTTCCCA 
ACTAACTCTT ATGTTCTGGA CCCGCAGTAT TACGGCCAGA TAGAGCTAAT TGCCAACATG 
ATGAAGCAAT ACCCAAACAC TAACGTAACC ATTGAAGGTC ACTGCAGTAA AAAGGGAAGT 
TATGAGTTAA ATATGGCGCT GTCACACAAT AGAGCTAATG CGGTAACGCA AGTATTAACG 
AGCCAATTTG GCATAGCGCC AAGCCGATTA AACGCTATTG GGTATAGCTT TGATAGGCCA 
GTCGATATGA GCGACACTGA AGAAGCCCAT AGACGTAATC GTCGTGTGAT TGCCGAAATC 
AGTGGTGAGG ATACCGCTGC CGACCTGAAG TGGAATATTT ACACAGTAGA TAAGCAAGTA 
AACTAA
 
Protein sequence
MNKLLVLLML ALSTGCSMND ISSMDSPTEQ KFDLNDQDRD GVIVARERCP ETLSGATISN 
YGCGQIKPIH ERQELKILFP TNSYVLDPQY YGQIELIANM MKQYPNTNVT IEGHCSKKGS 
YELNMALSHN RANAVTQVLT SQFGIAPSRL NAIGYSFDRP VDMSDTEEAH RRNRRVIAEI 
SGEDTAADLK WNIYTVDKQV N