| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0378 |
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| Symbol | |
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| ID | 4017512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 431506 |
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| End bp | 433428 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637954363 |
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| Product | histidine kinase |
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| Protein accession | YP_561396 |
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| Protein GI | 91791745 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTGT TCCGTCAGAT CTATGCGTTA TTGTTCGGCC TTTTCTTGTT AACGATAACA
AGTGTCGCCT ATGTACAATT CCACGAAACG CAAAATTTTC TAGTTCAACA AATGGACTCA
GATCTAAATA ATGCCAGTAA TTCGCTAGGA TTAATGTTAG TCCCGGTGCT CGAGTCCGGT
GATGCTGTCG GTGCCGAAAC CTTGGTTAAC GTTATTTTTG AGGGCGGATA TTATCAACAA
ATTAAGCTCA CTTGGCTTGT CGATGGTAAA CAACAAGTTT GGAATAACGC CATTCGAGTT
GAAAACGTGC CACAGTGGTT TATTGATCTT GAGATTTTTA GCACTATCAC CAAACAAAGC
ACTATCACCT CAGGCTGGCT ACAGCTTGCC GAAATAGAAA TTACTGCTCA CCCAGGCTTT
GGTTACCACG AGCTGTGGCG CATTATTACC AATACCATCA TGGTGTTTGC AGTACTGTTC
TTAATTGCCA TCTTATTAGC CCGTGTGGGA CTCACATTAA TTCTAAAACC TTTGCACAAC
CTCTCTGAAC ACGCTCAGAG AATCGCTAAG CGTCAGTTTG GGCCTGACAT GCCAACTCCT
AAGACTGAAG AGCTTAAAGA GCTTGTGCGG GCTTTTAACA GCATGTCATC TCAGTTAAAA
CAAGTATTCA ATTCACTGGA TGAAGAAGTC TCAGCATTAA GAAAAAAGAA TTTAGTAGAC
CAAGTCTCCA ACCTGCCAAA TCGTCAGTAT ATGGTCAGTC GCTTAAATGG CTGGTTAACT
GAACCCAGTG GTGGTGCACT CTTCCTAGCA AAATTTGATT GGCTAGAAGA AGTCCATAGC
AAATATGGAT ATCAAGTCAG AGATGAAACT ATTCATCTGT TAGCTCAAAA AATGGAACAA
CATTTACAAG AAATAGCCCC ATCAGTTATC GCGCGTATTG CTGCGTATGA ATTCGCTTTT
CTCGTTGAAG ATGTTGAACA CGATCAGCTC AATAAATACT TACAAACGCT GATACGCACC
TTAAACAAAG AAATATCTAA AGCCGGATGC AAGCCCAACG AAGGCTTCGC CTTGGGTGTG
GCTGAACGAT TTGGTCAAAT GAAAGTTGCT GATATTATGG CTCAAGCAGA CAACGCCTTG
CAAAAAGCCC TATTAGAAAA CAAAGTCTTC CATTGGTTTG AGACCTCACA ACAACAACTC
TTTAGCAGAG AAGAATGGCG AGATAACCTT ACCTTAGCCA TCAGCGAGAA ACAATTTCAA
TTCAGATGGC AACCCATTCA ATTTTGTGAC AATCAGCAAA TCAGTCAGCG TGAACTTTAT
TGTCAGCTCC AGTTAGGTGA CAAACTACTC CACGCAGGCC AGTTTATGCC TTATATTGAA
CTGCTTTCTT TAGGCTCTCT GCTCGACAAG TGCCTCATTG AAAAGGTCGC TGAGTCTAAG
TTATTAGAGA GAAATTATGA ATCCGTTGCC ATCAATTTAA CCCATAACAG TATAGGTGAT
ACTGACTTCC ATCTATGGTT GAAGCAGGTA TTACGCTCAA CACCTCATGT GGAAAGGATG
TGCTTCGAAA TCCCAGAAGC CAGTGTATAC AGCGATCTGG ATGCCTGTGA AAAACTGTGC
AGTATTATCA GAGACAGTGG TGCCCATTTT GGTATAGACC ACTTTGGCAG ACAATTTGGC
TCTATGGCTT ATTTACAGAG TTTACGTCCA AGCTATGTAA AATTAGATCA GTCTTTCGCG
TATATAGACG ACAACCAGCA CAACAGTGAA TTATGCCGCG CCTTGGTTAA CGTCGCTAAA
GGATTAGACA TACAAGTGAT AGTTACAGGT ATTCAAGAAG AAGATCAGCT TGAACGTTTC
AGAACCTTAC GACTAGACGC TTACCAAGGT TTTATTGCAC CGCCTGTCAA TATTAAATCC
TAG
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| Protein sequence | MTLFRQIYAL LFGLFLLTIT SVAYVQFHET QNFLVQQMDS DLNNASNSLG LMLVPVLESG
DAVGAETLVN VIFEGGYYQQ IKLTWLVDGK QQVWNNAIRV ENVPQWFIDL EIFSTITKQS
TITSGWLQLA EIEITAHPGF GYHELWRIIT NTIMVFAVLF LIAILLARVG LTLILKPLHN
LSEHAQRIAK RQFGPDMPTP KTEELKELVR AFNSMSSQLK QVFNSLDEEV SALRKKNLVD
QVSNLPNRQY MVSRLNGWLT EPSGGALFLA KFDWLEEVHS KYGYQVRDET IHLLAQKMEQ
HLQEIAPSVI ARIAAYEFAF LVEDVEHDQL NKYLQTLIRT LNKEISKAGC KPNEGFALGV
AERFGQMKVA DIMAQADNAL QKALLENKVF HWFETSQQQL FSREEWRDNL TLAISEKQFQ
FRWQPIQFCD NQQISQRELY CQLQLGDKLL HAGQFMPYIE LLSLGSLLDK CLIEKVAESK
LLERNYESVA INLTHNSIGD TDFHLWLKQV LRSTPHVERM CFEIPEASVY SDLDACEKLC
SIIRDSGAHF GIDHFGRQFG SMAYLQSLRP SYVKLDQSFA YIDDNQHNSE LCRALVNVAK
GLDIQVIVTG IQEEDQLERF RTLRLDAYQG FIAPPVNIKS
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