Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0372 |
Symbol | |
ID | 4016698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 425545 |
End bp | 426099 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637954357 |
Product | hypothetical protein |
Protein accession | YP_561390 |
Protein GI | 91791739 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000170684 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTTATT TCGTGGCTGT TAATGGCAGC TGCACTTACC TATTGGATAT TCCCTTGGCC ATTTCATTGC CCGAAGCAAA ATCGAAAAAA ATAGCCCTTT TTGTGGATGT GCAAAACATC TATTACACCT GCCGTGAAGC CTATGGTCGG CAGTTTAATT ACCGAAAATT ATGGCAACTG GTGAGCCAGC AAGGCGAAAT AGTGCAAGCG GTGGCTTATG CCATACATAA GGGGGATGAC GGCCAGCTTA AGTTTCAAGA TGCGCTCAAA CACATAGGTT TTGAGGTCAA GCTTAAGCCC TTTATTCAGC GCGCCGATGG CTCGGCCAAA GGTGATTGGG ATGTGGGTAT TACTATCGAT GTGATGGAGG CGGCAGCAGA TGTGAATACT GTGATTCTAT TGTCCGGAGA TGGTGATTTT GATCGTTTGC TAGTTAAAAT CTACCAAAAA CACGGGGTAG ACACGCAGGT CTATGGGGTG CCCAGTTTAA CGGCTAAATC CTTAATGGAT TCAGCGGGGC AATTTCACCC CATAGATGCC AGTTGGCTTT TGTAA
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Protein sequence | MAYFVAVNGS CTYLLDIPLA ISLPEAKSKK IALFVDVQNI YYTCREAYGR QFNYRKLWQL VSQQGEIVQA VAYAIHKGDD GQLKFQDALK HIGFEVKLKP FIQRADGSAK GDWDVGITID VMEAAADVNT VILLSGDGDF DRLLVKIYQK HGVDTQVYGV PSLTAKSLMD SAGQFHPIDA SWLL
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