Gene Sden_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0372 
Symbol 
ID4016698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp425545 
End bp426099 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content46% 
IMG OID637954357 
Producthypothetical protein 
Protein accessionYP_561390 
Protein GI91791739 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000170684 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTTATT TCGTGGCTGT TAATGGCAGC TGCACTTACC TATTGGATAT TCCCTTGGCC 
ATTTCATTGC CCGAAGCAAA ATCGAAAAAA ATAGCCCTTT TTGTGGATGT GCAAAACATC
TATTACACCT GCCGTGAAGC CTATGGTCGG CAGTTTAATT ACCGAAAATT ATGGCAACTG
GTGAGCCAGC AAGGCGAAAT AGTGCAAGCG GTGGCTTATG CCATACATAA GGGGGATGAC
GGCCAGCTTA AGTTTCAAGA TGCGCTCAAA CACATAGGTT TTGAGGTCAA GCTTAAGCCC
TTTATTCAGC GCGCCGATGG CTCGGCCAAA GGTGATTGGG ATGTGGGTAT TACTATCGAT
GTGATGGAGG CGGCAGCAGA TGTGAATACT GTGATTCTAT TGTCCGGAGA TGGTGATTTT
GATCGTTTGC TAGTTAAAAT CTACCAAAAA CACGGGGTAG ACACGCAGGT CTATGGGGTG
CCCAGTTTAA CGGCTAAATC CTTAATGGAT TCAGCGGGGC AATTTCACCC CATAGATGCC
AGTTGGCTTT TGTAA
 
Protein sequence
MAYFVAVNGS CTYLLDIPLA ISLPEAKSKK IALFVDVQNI YYTCREAYGR QFNYRKLWQL 
VSQQGEIVQA VAYAIHKGDD GQLKFQDALK HIGFEVKLKP FIQRADGSAK GDWDVGITID
VMEAAADVNT VILLSGDGDF DRLLVKIYQK HGVDTQVYGV PSLTAKSLMD SAGQFHPIDA
SWLL