| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0363 |
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| Symbol | |
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| ID | 4017886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 405074 |
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| End bp | 407797 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954344 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_561381 |
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| Protein GI | 91791730 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000126522 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGGCA AACTACTGAC AAAATTATTC GGAAGTCGAA ACGACCGTAC CTTAAAAAAC
CTTGGCAAAA TCGTCACCCA AATTAACGCA TTAGAAGCAG ACTTTCAAAA GCTGTCGGAC
GATGAGCTCA AAGCAAAAAC CCTTGAGTTT CGTGAGCGTT TAGAAAAAGG TGAAACTTTA
GACGACATTA TGGCAGAAGC TTTCGCCACT GTGCGTGAAG CCTCTGTCCG TGTGTTTGAG
ATGCGCCCGT TTGATGTGCA GCTCTTAGGC GGCATGGTGC TAAACAGTAA TCGTATTGCT
GAGATGCGTA CCGGTGAAGG TAAAACACTG ACCGCGACAC TGCCCGCTTA CTTAAATGGT
CTAAGCGGTA AAGGCGTTCA CGTGATTACG GTGAATGACT ACCTTGCTGG TCGAGATGCG
GAAAATAACC GCCCATTATT TGAATTCTTA GGCTTAACCG TCGGAATTAA CGTTGCGGGT
ATTGGCCAAG CCGAAAAGAA AATGGCGTAC GCAGCAGATA TCACTTACGG TACCAACAAT
GAGTTTGGTT TCGATTATCT GCGCGACAAT ATGGCGTTCT CACCCCAAGA GCGCGTTCAG
CGTCCGCTGC ATTATGCGCT TATCGATGAA GTGGATTCAA TCCTTATCGA TGAAGCTCGT
ACCCCTTTGA TTATTTCTGG TGCAGCTGAA GACAGTTCAG AGCATTACCG TAAAGTGAAT
GTGCTTATTC CATCGCTTAT CCGTCAAGAA AAAGAAGACA CAGAAGATGA AGTTGGCGAA
GGCGACTACA GCATAGACGA GAAAGGCAAG CAGGTTCATT TGACTGAACG TGGTCAAGAG
AAAGTTGAAC TCTTGTTAAT TGAATCAGGC ATGTTAGCCG AAGGTGACTC TCTGTATTCC
GCGGCGAATA TTTCACTACT GCATCACGTG AATGCGGCAT TGCGTGCCCA CACCTTATTT
GAAAAAGACG TTGATTACAT AGTACAAGAC AATGAAGTGA TCATAGTCGA TGAGCATACT
GGCCGTACTA TGCCTGGACG TCGTTGGTCA GAAGGCTTAC ATCAAGCGGT TGAAGCCAAA
GAAGGGGTTC ATATTCAAAA TGAAAACCAG ACTCTAGCCT CGATAACGTT CCAGAATTAC
TTCCGTCAGT ATGAAAAGCT TGCCGGTATG ACGGGTACTG CTGATACTGA AGCATTTGAA
TTTCAACACA TTTATGGTTT AGATACCGTC GTCGTACCAA CTAATAAGCC TATGGTTCGT
AACGATATGG CTGACTTGGT GTATTTGACG GCCAGTGAGA AATACGCTGC GATTATTAAA
GATGTTGAAG GTTGCCGTGA ACGTGGTCAG CCCGTGCTCG TAGGTACAGT TTCCATTGAG
CAGTCTGAAT TATTGGCATC ATTGCTGAAA AATGCCAAAA TTCCCCATAG CGTACTTAAT
GCTAAATTCC ATGAAAAAGA AGCTGAGATT GTGGCTCAAG CAGGCCGCAC CGGCGCGGTA
ACCATAGCCA CTAACATGGC GGGTCGTGGT ACGGATATCG TCTTGGGTGG TAACTGGAAG
GTTGAGATTG AAAACTTAAC CAATCCAACG GATGAGCAAA TAGCAAAAAT ACGTGCCGAT
TGGCAAATCC ATCATGACGC CGTTATTGCT GCAGGTGGTT TACATATCTT AGGTACAGAA
CGTCACGAAT CTCGTCGTAT CGATAACCAG CTTCGTGGTC GTTCAGGTCG TCAAGGTGAT
GCGGGTTCAT CACGCTTCTA TCTCTCCATG GAAGACAGCT TAATGCGTAT CTTCGCTTCA
GAGCGAGTAT CCGGCATGAT GAAGAAACTC GGCATGGAAG AAGGCGAAGC CATCGAACAT
CCTTGGGTAT CGCGGGCCAT TGAGAATGCA CAGCGTAAAG TTGAAGCACG TAACTTCGAT
ATTCGTAAGC AATTACTTGA ATACGATGAT GTGGCTAACG ATCAACGTCA GGTGGTTTAC
TCACAGCGTA ATGAGTTGAT GGACGCAACG AGCATTCAAG ACACCATCAA AAATATCGAA
GCCGATGTGA TAAATGATCT AGTGGATCAA TATATTCCAC GTCAATCACT GGAAGAACTG
TGGGATGTAC CTGGGCTTGA GCAGCGATTC CACCAGGAGT TTGGCATTCA ATTGCCAATT
CAGCAATGGT TAGAGAAAGA AGAAGACTTG CATGAAGAAA CCTTGCGTGA GCGCATAGTG
GCTTCGTGGA GTGATGCATA CCAAGCTAAA GAGGCTATGG TCGGAGCCGA TGTGCTACGT
CAATTCGAAA AAGCGGTCAT GTTGCAAACG TTAGACGGAC TCTGGAAAGA GCATTTAGCG
GCGATGGATC ATTTGCGTCA AGGCATACAC CTACGTGGTT ATGCACAAAA GAATCCTAAG
CAGGAATACA AGCGCGAATC TTTCGAGCTA TTCCAACAAA TGTTAGATTC GTTAAAGCAT
GATGTAATCA GCGTGCTATC TAAAGTGCAA GTTCAGGCAC AATCAGATGT TGATGACATG
GAGCAGCGTC GCCGTGAAGA AGAAGCGAAA ATTCAACGTG ACTATCAACA TGCTGCAGCG
GAAGCATTAA CTGATGAGTC TCAAGCATCT AGCGACAACA CACCTAAGAC AATGATCCGT
GAAGGTGACA AAGTGGGCCG CAACGATCCT TGTCCCTGTG GTTCTGGTAA AAAATACAAA
CAGTGTCACG GTAAGTTAAG CTAA
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| Protein sequence | MLGKLLTKLF GSRNDRTLKN LGKIVTQINA LEADFQKLSD DELKAKTLEF RERLEKGETL
DDIMAEAFAT VREASVRVFE MRPFDVQLLG GMVLNSNRIA EMRTGEGKTL TATLPAYLNG
LSGKGVHVIT VNDYLAGRDA ENNRPLFEFL GLTVGINVAG IGQAEKKMAY AADITYGTNN
EFGFDYLRDN MAFSPQERVQ RPLHYALIDE VDSILIDEAR TPLIISGAAE DSSEHYRKVN
VLIPSLIRQE KEDTEDEVGE GDYSIDEKGK QVHLTERGQE KVELLLIESG MLAEGDSLYS
AANISLLHHV NAALRAHTLF EKDVDYIVQD NEVIIVDEHT GRTMPGRRWS EGLHQAVEAK
EGVHIQNENQ TLASITFQNY FRQYEKLAGM TGTADTEAFE FQHIYGLDTV VVPTNKPMVR
NDMADLVYLT ASEKYAAIIK DVEGCRERGQ PVLVGTVSIE QSELLASLLK NAKIPHSVLN
AKFHEKEAEI VAQAGRTGAV TIATNMAGRG TDIVLGGNWK VEIENLTNPT DEQIAKIRAD
WQIHHDAVIA AGGLHILGTE RHESRRIDNQ LRGRSGRQGD AGSSRFYLSM EDSLMRIFAS
ERVSGMMKKL GMEEGEAIEH PWVSRAIENA QRKVEARNFD IRKQLLEYDD VANDQRQVVY
SQRNELMDAT SIQDTIKNIE ADVINDLVDQ YIPRQSLEEL WDVPGLEQRF HQEFGIQLPI
QQWLEKEEDL HEETLRERIV ASWSDAYQAK EAMVGADVLR QFEKAVMLQT LDGLWKEHLA
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FQQMLDSLKH DVISVLSKVQ VQAQSDVDDM
EQRRREEEAK IQRDYQHAAA EALTDESQAS SDNTPKTMIR EGDKVGRNDP CPCGSGKKYK
QCHGKLS
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