Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0360 |
Symbol | lpxC |
ID | 4017883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 402712 |
End bp | 403632 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637954341 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_561378 |
Protein GI | 91791727 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000238422 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTTC AAAGAACTGT TCAAAAAATG GTACAGACCA CTGGTGTTGG ATTACATTCC GGCAACAAGG TGACGCTGCG CATTATGCCT GCCCCCGTTA ATTCTGGGAT AGTACTGACA CGTACCGATC TCAGCCCTGC AGTGTCTATC CCTGCAAAGG CGGAGTTAGT GCGTGAAACT ACTATGTGTA CCGCACTTGT GAATGACGCG GGTATTCGTA TCTCAACCAT AGAACACCTA TTCGCAGCCT TAGCTGGACT TGGCATAGAT AACGCTGTTA TCGAAGTCGA TGCCCCTGAA ATCCCTATTA TGGATGGCAG TGCCAGCCCC TTTGTGTTTT TATTGCAAAG TGCGGGAATT AAAGAGCAGG CTGCGGCAAA GAAATACATT AAAATCAACA AGACAATACG TGTTGAAGAC GGCGATAAAT GGGCTGAATT GAAGCCATTT AAAGGCTTTA GAGTTAATTT TAAAATTGAC TTTAATCATC CTGAAATTGC CCGTAGTCAG CAGCATATGG TGATGGACTT TTCGACCTCT GCGTTTGTAA AAGACATCAG CCGTGCCCGT ACTTTTGGTT TTATGCGCGA TATCGAGTAC TTGCGTGCTA ATAATCTCGC CCTGGGTGGC AGCATGGAAA ATGCGGTTGT GTTGGATGAA TACCGCGTCC TCAACCCCGA TGGTCTGCGT TATGAGGACG AGTTTGTAAA ACACAAAATT CTAGATGCGT TCGGTGATCT GTATGTAGCA GGTCATGCGA TAGTCGGAGA GTTTTGTGCA TTCAAAACCG GCCATGCGCT GAACAACCAG TTAGTTAGAG CCTTATTAGT ACAGCAAGAT GCTTGGGAAT TGGTGAGCTT CGATAAAGAA GCCGATGTGC CTGTGAGCTT TATGGTGCCA GGCACTCAAG CCTTCGCATA G
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Protein sequence | MIFQRTVQKM VQTTGVGLHS GNKVTLRIMP APVNSGIVLT RTDLSPAVSI PAKAELVRET TMCTALVNDA GIRISTIEHL FAALAGLGID NAVIEVDAPE IPIMDGSASP FVFLLQSAGI KEQAAAKKYI KINKTIRVED GDKWAELKPF KGFRVNFKID FNHPEIARSQ QHMVMDFSTS AFVKDISRAR TFGFMRDIEY LRANNLALGG SMENAVVLDE YRVLNPDGLR YEDEFVKHKI LDAFGDLYVA GHAIVGEFCA FKTGHALNNQ LVRALLVQQD AWELVSFDKE ADVPVSFMVP GTQAFA
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