Gene Sden_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0352 
SymbolmraY 
ID4017875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp392985 
End bp394067 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content49% 
IMG OID637954333 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_561370 
Protein GI91791719 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTTT ATCTAGCCGA ATATTTAACC CAATTTCATA CAGGGTTTCA TGTGTTTTCT 
TATGTGACAT TTCGCGCCAT CTTGGGCTTG TTGACTGCAT TGGTGTTTAG CCTATGGTGT
GGTCCTAAAC TTATCCGCCG TCTGCAGTTA TTGCAGATTG GACAAGTGGT GCGTAATGAC
GGCCCTGAGT CACATTTTTC TAAACGTGGT ACGCCGACCA TGGGCGGCTT GCTGATCCTA
GCGGGCATCT TTGTTAGCGT CTTGTTGTGG GGCGATCTTG AGAGCCGCTA CGTGCTGGTA
ATGCTGTTTG TGCTGGGTAG CTTCGGCACT ATTGGTTTTA TCGATGATTA TCGAAAAGTG
GTGCGTAAAG ACACGAAAGG CTTAATTGCC CGTTGGAAAT ACATTCTGCA GTCTTTGGCG
GCGCTTGTGG TTGCTGTGTT CTTGTACAGC AGTTCAACCT TGCCAGGTGA AACGCAACTT
GTGGTACCGT TTTTCAAAGA TGTGATGCCG CAATTGGGCT TGGTCTTCAT CGTGCTGGCT
TATTTCACCA TTGTTGGCGC CAGTAATGCG GTGAACCTGA CCGATGGGCT GGACGGTTTA
GCGATTATGC CCACTGTGAT GGTGGCTGGT GCGTTTGCAC TGATCGCGTA TTTATCGGGT
CACGTACAGT TCGCCAATTA TCTGCATATT CCTCATCTGC CTGAAGCGGG TGAGCTGGTG
ATAGTCTGCA CCGCCATTGT GGGAGCAGGT CTTGGGTTTC TTTGGTTTAA CACTTACCCA
GCGCAGGTTT TCATGGGTGA TGTGGGGTCA CTGGCCTTGG GCGCCGCATT AGGTGCTATC
GCGGTATTAG TGCGTCAGGA AATTCTATTG GTGATCATGG GCGGGGTATT CGTGATGGAA
ACCGTGTCTG TGATCTTGCA GGTGGGTTCA TACAAGTTGC GTGGTCAGCG TATTTTCCGC
ATGGCGCCAA TTCATCACCA CTATGAGCTT AAAGGTTGGC CAGAGCCACG GGTAATCGTG
CGCTTTTGGA TTATTTCATT GTTTTTAGTG TTACTTGGCC TTGCCACGTT GAAGTTAAGG
TAA
 
Protein sequence
MLVYLAEYLT QFHTGFHVFS YVTFRAILGL LTALVFSLWC GPKLIRRLQL LQIGQVVRND 
GPESHFSKRG TPTMGGLLIL AGIFVSVLLW GDLESRYVLV MLFVLGSFGT IGFIDDYRKV
VRKDTKGLIA RWKYILQSLA ALVVAVFLYS SSTLPGETQL VVPFFKDVMP QLGLVFIVLA
YFTIVGASNA VNLTDGLDGL AIMPTVMVAG AFALIAYLSG HVQFANYLHI PHLPEAGELV
IVCTAIVGAG LGFLWFNTYP AQVFMGDVGS LALGAALGAI AVLVRQEILL VIMGGVFVME
TVSVILQVGS YKLRGQRIFR MAPIHHHYEL KGWPEPRVIV RFWIISLFLV LLGLATLKLR