| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0350 |
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| Symbol | murE |
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| ID | 4017873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 390106 |
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| End bp | 391614 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954331 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_561368 |
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| Protein GI | 91791717 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGTT TATCTGATAT TTTAGCCCCT TGGTTTCATT ACGCTGGGGT TGAATCAGCC
TCCAGCATGA GCTTAGACAG CCGTAAAGTG ACGCAAGGAT GTTTATTTAT TGCCTTGCCC
GGGCATCAAG TGGATGGCCG TGCTTATATC GAACAAGCGA AAGCCCAAGG CGCGGTAGCG
GCCTTGGTGC ATACGGATGA CCCTGATTCC CATGGAAAGG TAGAAAATCT AGGCAGCGGT
ATCACGCCTT GGCCTGTGGT GAATTTCTTT CAGTTAAGCA GTCAGCTTAG TGCCGTTGCG
GCGCAGTTTT ATCCACTAAC GCCACAAAAA ATGGCACTTA TTGGAATCAC TGGCACCAAT
GGCAAGACCT CTGTAAGCCA ATTGATCGCA CAGCTCACTA GTTTATTGGG CGGCAAAGCC
GCCGTTATGG GCACTTTAGG CAATGGCCTG TGGGGCCAGT TAGTTGATAG TGGCAACACT
ACCGCCGATG CCGTCACTGT CATGGCACAG TTACATGACT TTGATGTCAA GGGCGCAGAT
ATTTGTGCCA TGGAAGTCTC AAGCCATGGC TTAGTGCAAG GGCGAGTGAC AGCTGTGCCT
TTTGATATTG CAGTGTTTAC TAACTTAACG CGCGATCATC TTGATTATCA TGGAGATATG
GCCTCTTACG CCAGCGCTAA GAAGCGGCTA TTTCAATTCC CAAGCCTCAA ATATGCATTG
CTAAACCTTG ATGATGACAC AGGTGCCCAG TGGTTTGAGG AACTTGCCGC CACTAAACGT
AAAGGCTTTA GTGTTAGCCC CAATGCCAAG GCTTGCTATT ACACGGATAA GCTTCATTTT
GATGATGCCG GTGTGCAAGG GGATTTTTAT TATCACGACT TTGGCGAAAA CGCAGTCTCT
CAACATAAAG CGCGGCTGGT ATCGCCACTA TTAGGTGCAT TTAATCTATC TAATTTATTA
GCCGCTATTG CCGCTTTACA CCTTAGTGGA GTGGCCATGG CGGATTTACT CGCCGTCACC
CCAAAATTAG TGCCAGTTGC TGGACGCATG GAGCGTTTTT CCCTGCCACA AGGTGCCAGC
CTAGTGGTGG ATTATGCCCA CACGCCAGAT GCCATAGAGC AAGCCCTAAA AGCGCTGCGT
ATTCATTGCC ATGGGCAATT ATGGTGTGTA TTTGGCTGTG GCGGTGACAG AGATAAAGGC
AAACGGCCCT TGATGGCCCA AGCTGCCGAG CGGTTTGCCG ACAAGTTAAT GGTCACCAGC
GACAATGCTC GCAGTGAAGA TCCAAGCGCC ATCATTGGCG ATGTGCTTAA GGGCTTAACT
CAGCCTGAAA ATGCCTTAAT GGAAGTGGAC AGAGTCAGCG CAGTTAAACG GGTTGCCACA
CTTGCTAAGG CAGGAGACAT AGTGCTTTTG GCGGGCAAGG GGCATGAAAC CTATCAAGAA
ATTGCTGGGC AGCGTTTAGA TTATGATGAA CGCGCCTTGG CACTGACATT ATCTCAGGTG
ACATTATGA
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| Protein sequence | MMRLSDILAP WFHYAGVESA SSMSLDSRKV TQGCLFIALP GHQVDGRAYI EQAKAQGAVA
ALVHTDDPDS HGKVENLGSG ITPWPVVNFF QLSSQLSAVA AQFYPLTPQK MALIGITGTN
GKTSVSQLIA QLTSLLGGKA AVMGTLGNGL WGQLVDSGNT TADAVTVMAQ LHDFDVKGAD
ICAMEVSSHG LVQGRVTAVP FDIAVFTNLT RDHLDYHGDM ASYASAKKRL FQFPSLKYAL
LNLDDDTGAQ WFEELAATKR KGFSVSPNAK ACYYTDKLHF DDAGVQGDFY YHDFGENAVS
QHKARLVSPL LGAFNLSNLL AAIAALHLSG VAMADLLAVT PKLVPVAGRM ERFSLPQGAS
LVVDYAHTPD AIEQALKALR IHCHGQLWCV FGCGGDRDKG KRPLMAQAAE RFADKLMVTS
DNARSEDPSA IIGDVLKGLT QPENALMEVD RVSAVKRVAT LAKAGDIVLL AGKGHETYQE
IAGQRLDYDE RALALTLSQV TL
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