| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0336 |
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| Symbol | |
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| ID | 4020352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 375988 |
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| End bp | 377436 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954317 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_561354 |
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| Protein GI | 91791703 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCAAG CTATTGTAAA AGAAGGCATA AAAACAGTCG TAACAGCAAG GGCAAAAACC
TTGTATGAGA AAGTTTGGGA TGCACACTTA GTGGCTAGTC CAGCTGGTGA AGCGCCGATT
ATTTATGTGG ACCGTCATCT GGTGCACGAA GTGACCTCAC CCCAAGCATT TAGTGGCTTA
AGAGCTGCGG GCCGGCCATT ACGTGCGCCG CAAAAAACCT TTGCTACCAT GGATCATAAC
ACCTCAACCA AGAGCGCGAG CCTAGATGCC CTAAGCCCTA TGGCGCGCAT TCAAGTTGAT
ACCTTAGCGC AAAACTGTAA AGACTTTGGG GTGAAGCTGT ACGACATTCA TCACCCTAAT
CAAGGCATAG TACACGTCAT GGGGCCTGAA CTTGGAATAA CCTTGCCGGG CAGTGTCATT
GTCTGCGGCG ACTCGCATAC GGCAACCCAT GGTGCTTTTG GTGCCTTGGC GTTTGGCATA
GGGACTTCAG AAGTTGAGCA TGTACTGGCG ACGCAAACTT TAAGGCAGTT ACAAGCAAAA
ACCATGAAGG TGGAAGTGCG CGGCAAGGTG ACTGAGGGCG TTACGGCCAA AGATATCGTG
CTTGCCATCA TAGGAAAGCT AGGCATGGAT GGTGGCACAG GCTTTGTGGT GGAGTTTTGT
GGTGAAGCCA TCAGTGCTTT GTCCATGGAA GGACGGATGA CCTTGTGCAA TATGGCTATT
GAAATGGGTG CGAAAGCGGG GATGGTGGCG CCAGATCAAA CGACTTTTGA CTATTTAAAA
GGCCGTGAGT TTGCTCCCAA AGATGACAAC TGGCAGCACG CCATTGCCAC TTGGTCACAA
CTTTACACGG ATGCAGAAGC AAAATTTGAT GCTGAAGTGG TGTTAGAGGC TCAAGATATT
GCGCCGCAGT TAACCTGGGG AACTAACCCT GGGCAAGTGG TCGCCATCGA TGGTGAAGTT
CCCAATCCTG CTAACGAAAT CAATAGCACA GAACGCAGCA GCATGGTGAA AGCATTGGAG
TACATTGGCT TAACGCCTGG CACTAAGATG ACTGACATCA GCATCAACAA AGTATTCATC
GGTTCATGCA CCAACTCACG TATCGAAGAT TTACGTTCGG CGGCGATTCA CGCCAAGGGC
CGTAAGGTGG CTGAAGGCGT GGTGGCTATC GTGGTGCCGG GTTCGGGTCA AGTGAAGTTG
CAGGCCGAAT CAGAAGGTTT AGATAAAATC TTTATCGATG CAGGTTTCGA ATGGCGCTTA
CCCGGTTGTT CCATGTGTTT GGCCATGAAT GATGACAGGT TAGAGGCTGG CGATCGCTGC
GCCTCCACCA GTAATCGTAA TTTTGAAGGT CGCCAAGGTC GTGGAAGCCG TACTCATTTA
GTGAGCCCCG CCATGGCTGC CGCTGCCGCG ATTGCGGGCC ACTTTGTCGA TATTCGTAAA
CCTTACTAA
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| Protein sequence | MGQAIVKEGI KTVVTARAKT LYEKVWDAHL VASPAGEAPI IYVDRHLVHE VTSPQAFSGL
RAAGRPLRAP QKTFATMDHN TSTKSASLDA LSPMARIQVD TLAQNCKDFG VKLYDIHHPN
QGIVHVMGPE LGITLPGSVI VCGDSHTATH GAFGALAFGI GTSEVEHVLA TQTLRQLQAK
TMKVEVRGKV TEGVTAKDIV LAIIGKLGMD GGTGFVVEFC GEAISALSME GRMTLCNMAI
EMGAKAGMVA PDQTTFDYLK GREFAPKDDN WQHAIATWSQ LYTDAEAKFD AEVVLEAQDI
APQLTWGTNP GQVVAIDGEV PNPANEINST ERSSMVKALE YIGLTPGTKM TDISINKVFI
GSCTNSRIED LRSAAIHAKG RKVAEGVVAI VVPGSGQVKL QAESEGLDKI FIDAGFEWRL
PGCSMCLAMN DDRLEAGDRC ASTSNRNFEG RQGRGSRTHL VSPAMAAAAA IAGHFVDIRK
PY
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