| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0332 |
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| Symbol | |
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| ID | 4020348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 369240 |
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| End bp | 371081 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954313 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_561350 |
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| Protein GI | 91791699 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATT TAAGCCCAGA CTTGGACCCA AGATTAACGT CATCGGAAGA TGAGTTGAGT
GCACGTCTGC AGCAAGTATT CGGTTACCGC TCGTTTCGCG AAGGCCAGCG GGAAGTCATG
GAGCGGACTT TAGCGGGAGA AGACACCTTA GTCATCATGC CCACTGGGGG TGGCAAGAGC
ATCTGTTATC AGTTGCCGGC TTTATTATTC CAAGGCTTGA CCATAGTGGT TTCCCCTCTG
ATTTCATTAA TGAAAGATCA GGTCGACAGC CTAATTCAAA CCGGAGTACC CGCCGCTTAT
TTAAATTCAT CTCAGCCTCG AGAGGTGAGC ATGAATGTGT TAAGGCAACT GCACAGCGGT
GAAATTAAAT TATTGTACGT CTCCCCTGAG CGCTTATTGC GCGAGGATTT TATCGAGCGG
CTGCAACATT TGCATGTCAG TCTCTTTGCC GTCGATGAAG CGCACTGTAT CAGTCAGTGG
GGCCATGATT TCAGGCCTGA ATACGCCGAA CTTGGCCGCT TAAAACAGTT ATTTCCCCAT
GTGCCCTTAA TGGCGCTAAC CGCCACCGCA GATCAAGCGA CTCGTAAGAG CATCTGTGAA
CGGCTGAATA TCGAGCCTTT TTGTTTATTA TCCAGTTTCG ATAGACCCAA CATTCGCTAC
ACAGTGGCAG AAAAGCTCAA TGCAGCAAGC CAGCTGAAGC AGTTTATCGC GTCTCAGTCG
GGCAATAGCG GCATTATTTA TTGCAGTAGT CGCAGGCGAG TGGATGAGGT TGCTGAAAGA
CTGCGGTTAC AAGGATTAAA GGCCGAGGCA TATCATGCCG GTCGCAGCCA AGAAGAGCGC
GGCGACGTGC AAGATAAGTT TCTTAAAGAT CAGCTCGATA TCGTGGTTGC CACAGTGGCA
TTTGGCATGG GCATCAATAA ATCCAATGTG CGTTTTGTGG TGCATTACGA TATTCCCAAA
AGCGTGGAAG CCTATTATCA AGAAACCGGT CGTGCCGGTC GTGATGGCTT GGATGCAGAG
GCCTATATGT TGTTTGACCC TGCCGACATC GGCCGGGTTA GGCATTTAAT TGAGCAGTCA
GAACCCGGTC CGCAGCAGCA GGTGGAGTTT CATAAACTGC ATACCATGGC GGCTTTCGCC
GAGGCACAAA CTTGCCGCCG CCAAGTGTTA TTACACTATT TTGATGAAAG CGCATCAAAA
CCTTGTGGTA ACTGCGATAT CTGCATTAAC CCACCTAAGC GTTACGATGG CAGTGAAGAT
GCTAAGAAAG TCTTATCGTG TGTATTCCGC TTAGGTCAGC GTTTTGGCAT CAATCATTTG
ATTGAGGTAC TTAGGGGCTC AAAAGCGGCC AATGTGCTGG ATAGGGGCCA TGACAAGTTA
TCCACCTGGG GCATAGGCAA GGACAAGAGT CCGGAACATT GGCTCAGTGT CACTCGCCAG
TTGATTCATT TAGGCCTTGC CAGTCAGGAT GTGACCCGTG GCTCCTCGAT AACCTTGAAT
GATGCAGCAA GGCCAGTACT GAGAGGCGAA CAGACCTTGA AGCTTGCCGA GCCGCGTATT
CAGCTAGTCA GCAGTAAACG TAAAGCCAGT AATAGCCGCG CACCGCAACA GTATGATAGG
CAGCTATTTG CGCGGCTTAA ATTATTACGC CGTGAAATCG CCGAGAAAAA CGATATCCCG
CCTTACTTGG TATTTAACGA TGCCAGCTTG GCAGAGATGT CAGCCATGCT GCCCACAAGC
CCAGGTGAAA TGTTGGCGGT TAATGGGGTA GGCGAGCGCA AACTGAGCCG TTTTGGGGGT
GAGTTTTTAG ATGAAATAAG CCAATATCTT GCTAATGGTT AA
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| Protein sequence | MNNLSPDLDP RLTSSEDELS ARLQQVFGYR SFREGQREVM ERTLAGEDTL VIMPTGGGKS
ICYQLPALLF QGLTIVVSPL ISLMKDQVDS LIQTGVPAAY LNSSQPREVS MNVLRQLHSG
EIKLLYVSPE RLLREDFIER LQHLHVSLFA VDEAHCISQW GHDFRPEYAE LGRLKQLFPH
VPLMALTATA DQATRKSICE RLNIEPFCLL SSFDRPNIRY TVAEKLNAAS QLKQFIASQS
GNSGIIYCSS RRRVDEVAER LRLQGLKAEA YHAGRSQEER GDVQDKFLKD QLDIVVATVA
FGMGINKSNV RFVVHYDIPK SVEAYYQETG RAGRDGLDAE AYMLFDPADI GRVRHLIEQS
EPGPQQQVEF HKLHTMAAFA EAQTCRRQVL LHYFDESASK PCGNCDICIN PPKRYDGSED
AKKVLSCVFR LGQRFGINHL IEVLRGSKAA NVLDRGHDKL STWGIGKDKS PEHWLSVTRQ
LIHLGLASQD VTRGSSITLN DAARPVLRGE QTLKLAEPRI QLVSSKRKAS NSRAPQQYDR
QLFARLKLLR REIAEKNDIP PYLVFNDASL AEMSAMLPTS PGEMLAVNGV GERKLSRFGG
EFLDEISQYL ANG
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