| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0330 |
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| Symbol | |
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| ID | 4020346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 367537 |
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| End bp | 368439 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954311 |
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| Product | rarD protein |
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| Protein accession | YP_561348 |
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| Protein GI | 91791697 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAC TCGAATACCG TAAAGGCGTC ATTCTTGCTA TCTGCGCCTA CTGCTTGTGG
GGCGTTGCTC CGTTATATTT TAAACTTATT CAGCAGGTTT CCCCCCTCGA AATTTTAATG
CACAGGGTGT TGTGGTCTTT TGTACTCATG GTGGTACTGA TGCAGTTTGT TGGAGGCTTT
AGCCGCCTCA GGCAAGTCTT TAAGCAGCCA AAACAACTGC TTGTATTACT TATCACCTCC
CTGCTGATAG CCGGCAACTG GTTGATTTTC ATCTGGGCGA TTAATAACGA CCATATGCTA
GATGCAAGTC TTGGCTACTT CATCAACCCG TTATTCAACG TCTTGCTGGC GATGTTATTT
CTCGGTGAGC GCTTACGAAA ACTGCAATGG GCGGCGGTGG CATTAGCCAG TTTAGGGGTA
ATTATTCAGC TGATTTCTTT TGGTTCTATC CCGCTGGTGT CTTTAGTATT AGCCGCCTCT
TTTGGTTTTT ACGGCTTACT GCGCAAGAAA GTTAACGTGG ATGCCAAAAC CGGCTTACTG
GTGGAAACCG CCATCCTAGC TCCTGTCGCC TTAGGGTATT TATTACTCAC CTTAGACAGT
TCCAGCGCCA GCATGCTCAC CAATGATTGG ACATTGAATC TTACCTTAGT AGCGGCGGGG
GTTGTGACCA CTGTGCCCTT ATTGTGTTTT GCGGGCGCTG CTGTACGTAT TCCGTTTTCA
ATCTTAGGCT TTTTCCAATA TATCGGCCCA AGCATCATGT TTATCTTGGC GATAAAACTG
TTTAATGAGC CTTTCGATAT AGAAAAAGCC ATCACCTTCG GCTTTATTTG GGTGGCATTA
ATGATCTTTG TCAGCGATTT ATTACTGCAG CGACGCCGCA ATAAAAAAGC CAAAAACGCG
TAA
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| Protein sequence | MSELEYRKGV ILAICAYCLW GVAPLYFKLI QQVSPLEILM HRVLWSFVLM VVLMQFVGGF
SRLRQVFKQP KQLLVLLITS LLIAGNWLIF IWAINNDHML DASLGYFINP LFNVLLAMLF
LGERLRKLQW AAVALASLGV IIQLISFGSI PLVSLVLAAS FGFYGLLRKK VNVDAKTGLL
VETAILAPVA LGYLLLTLDS SSASMLTNDW TLNLTLVAAG VVTTVPLLCF AGAAVRIPFS
ILGFFQYIGP SIMFILAIKL FNEPFDIEKA ITFGFIWVAL MIFVSDLLLQ RRRNKKAKNA
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