Gene Sden_0320 details

Gene Information

• Locus tag: Sden_0320
• Symbol: pyrE
• ID: 4020433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 358537
• End bp: 359178
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637954301
• Product: orotate phosphoribosyltransferase
• Protein accession: YP_561338
• Protein GI: 91791687
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAGAGT ATCAAGTAGC GTTTATTGAG TTCGCTTTAG CGCGTAAGGT ATTAAGATTC 
GGTGAATTCA CCTTAAAATC TGGCCGTACT AGCCCTTATT TTTTTAATGC AGGTTTATTT 
AACACAGGTG GCGACTTGGC GCGTTTGGGG CGCTTTTACG CCGCGGCCTT AATGGATGCA 
GGTATAGAGT TCGACTTGTT GTTTGGCCCC GCTTACAAGG GTATCCCTAT TGCGACCACC 
ACAGCGGTGG CGCTTAACGA TCACCACAAT CTGGATGTGC CTTATTGCTT TAACCGCAAA 
GAAGCTAAGA CCCATGGTGA GGGTGGCAGC TTAGTGGGCA GCGAGCTTAC AGGCAGAGTC 
ATGTTGGTCG ATGATGTGAT TACTGCAGGG ACGGCTATTC GTGAGTCCAT GGATATCATT 
CAAGCGCATC AAGCGACGCT CGCTGGGGTC TTGATTGCTT TAGACAGGCA AGAGAAAGGC 
AAGGGTGAGT TATCGGCGAT TCAAGAGGTT GAGCGAGACT TTGGCTGTAA AATTGTTTCT 
ATCGTCAAGC TTGCCGATTT AATCAATTAC CTATCGGCAA AACCTGGCAT GGAAGCAGAG 
CTTGCTAGCG TCAGTGCTTA CCGTGAGCAA TACGGAATCT AG 

 

Protein sequence

MKEYQVAFIE FALARKVLRF GEFTLKSGRT SPYFFNAGLF NTGGDLARLG RFYAAALMDA 
GIEFDLLFGP AYKGIPIATT TAVALNDHHN LDVPYCFNRK EAKTHGEGGS LVGSELTGRV 
MLVDDVITAG TAIRESMDII QAHQATLAGV LIALDRQEKG KGELSAIQEV ERDFGCKIVS 
IVKLADLINY LSAKPGMEAE LASVSAYREQ YGI