| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0307 |
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| Symbol | |
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| ID | 4020420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 341937 |
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| End bp | 343244 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954288 |
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| Product | HipA-like protein |
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| Protein accession | YP_561325 |
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| Protein GI | 91791674 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTGC TCGATGTTTA TATGAATGGC TACCTTGTGG GTGAATTTAC CAAATCATCC
ACAGGCTCTC ATCAGTTTGC GTATGCCCCG CAGTGGTTAG CGATACCCGG TAGTCGCCCA
ATTTCTTTGT CTATGCCGCT ACGCAAGCAA GCTTATAAAG GTGATGAAGT TTATAACTTC
TTCGATAATT TGCTACCTGA TAATCTCGAA GTGAGAAACA GAGTCGTTGC TCGTCATAAT
GCTGATTCGA CCCATGCGTT TGACCTACTG GCTAAAATTG GTCAAGACAG TGTGGGTGCA
TTACAGCTTA TCCCCCATGG TCAGACTCCC TTTGATGTAA AAAAGATTGA GTCTAAACCG
CTATCCGAAA AGCAGTTGGA AAAAGTACTC AAGGGTTATC AGTCAAATAT CCCCTTAGGC
ATGTTAGCCG ATGACGATGA CTTTAGGATT TCTATTGCCG GTGCCCAAGA AAAGACGGCA
TTACTTAAAC TCAATGGACA GTGGCGACTG CCTATCAAAT CGACACCCAC GACCCATATT
ATTAAGCTGC CCATAGGTGA AATAAACAGC CACTCCCACA GCATAAATAT GTCTGACAGC
GTCGAAAACG AATACCTGTG CATGATGATA GTCAGAGAGT TTGGATTAGA TGCACCCGAG
TGCTCAATAA TCAAAGTGGG TGATATTAAA GCGCTTGCTG TGGAGCGATT CGATCGCAGG
CTCTCGTCTG ATGGTCAATG GATTATGCGG CTGCCCCAAG AAGACTTTTG TCAGGCATTA
AATATTCCAC CAGCGAAAAA ATATGAGAGC CATGGTGGCC CGGGTATTGA ACAAATTATG
CCTTATCTAT TGGGTTCGAT GAACTCAGAG CGAGACAGAG TTAACTTCAT CAAGTCCCAG
GTTTTGTTTT GGCTTTTAGC CGCAACCGAT GGCCATGCTA AAAACTTCTC ACTGTTCATT
GAGGCCGATG GCGGATATCG ACTAACGCCT TTTTACGATA TTTTATCCAT GTACCCTGTT
ATTGGCGGTA AAGGCTTAAA TATTCGCGAT GCCAAGCTTG CGATGGGGTT CAAGGCGACG
AAAGGTAAGA AATATCAAAT CAACCAAATT TTCCCACGGC ACTTTATCCA AACCGCTAAA
GCTGTGGGCT TTGATACTGG GATTATGATG GAGATGATGC ACGACATTGC TGACAAGGTA
GAGGCTGTGG TTGTGAAGGT TAAGGCGCAG CTGCCAGATG ATTTTCCAGC GCACATACGG
GATTCAATAT TGAGCGGATT AACTGACAGA GTTAAGCGCA TAGCTTAG
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| Protein sequence | MAVLDVYMNG YLVGEFTKSS TGSHQFAYAP QWLAIPGSRP ISLSMPLRKQ AYKGDEVYNF
FDNLLPDNLE VRNRVVARHN ADSTHAFDLL AKIGQDSVGA LQLIPHGQTP FDVKKIESKP
LSEKQLEKVL KGYQSNIPLG MLADDDDFRI SIAGAQEKTA LLKLNGQWRL PIKSTPTTHI
IKLPIGEINS HSHSINMSDS VENEYLCMMI VREFGLDAPE CSIIKVGDIK ALAVERFDRR
LSSDGQWIMR LPQEDFCQAL NIPPAKKYES HGGPGIEQIM PYLLGSMNSE RDRVNFIKSQ
VLFWLLAATD GHAKNFSLFI EADGGYRLTP FYDILSMYPV IGGKGLNIRD AKLAMGFKAT
KGKKYQINQI FPRHFIQTAK AVGFDTGIMM EMMHDIADKV EAVVVKVKAQ LPDDFPAHIR
DSILSGLTDR VKRIA
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