Gene Sden_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0305 
Symbol 
ID4020418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp340617 
End bp341345 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content40% 
IMG OID637954286 
Producthypothetical protein 
Protein accessionYP_561323 
Protein GI91791672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.420122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTATTT TTACTCATAG ACAAACCTGC ATTCGTAAGG CTCAAGCGCT GATGGAGCTG 
ACATGGAATG ATAAAACATC CGATCATATC AAAGATATGA TGACCCAAAA TACGACCATA 
GAAAGTCCGA TCAAACTGTC AGTCGGCTAT GAATCTTTTT GCGATACATT GAAATTATGG 
TATCGGGCAT TTCCAACCTT AAGCTATACG GAAAATAGTG TTGCTACACA TAACGGTGAA 
GTGATTATCG AATGGACGGC CAAGGGGCGC CAACTGGGGG AGTTCCTTGA TATTTCAGCA 
ACGGGTAGGC CAATTATTTA TAGTGGAATA ACCAATTTTG TTTTTATGCA GGACAAGGTT 
ATTCGTTATT CATCCAAGGT TCATATTCAA AGTATCATCA GTCAGCTTAT TGGCACGTCT 
TTCGATGCTC GGTTCGGTCA GCAAGAATCC AATAGTACTG AAAAGCTGTT TGATGTGATC 
CAACAGCTGC TCAGTACTAA GTTAACTCGA AGGCAAGTAG AGTGCTTGTC TCTGTCAACG 
CTGAATATAT CAGTGAAAGA AATTGCCTCT TTGCTGACAA TTGAAAGCAG TTCTGTTCAA 
ACACACCTAA AACGTGCGTT TGATTTGCTC CAAATTAGCA ATAAAAAAAT GTTTATGGCT 
TATATAACGG CAAACAACAC GATTGAAGTG TTTATCCGTA TGGGACTTTT CCTTCGGAAA 
AAGAATTAG
 
Protein sequence
MIIFTHRQTC IRKAQALMEL TWNDKTSDHI KDMMTQNTTI ESPIKLSVGY ESFCDTLKLW 
YRAFPTLSYT ENSVATHNGE VIIEWTAKGR QLGEFLDISA TGRPIIYSGI TNFVFMQDKV 
IRYSSKVHIQ SIISQLIGTS FDARFGQQES NSTEKLFDVI QQLLSTKLTR RQVECLSLST 
LNISVKEIAS LLTIESSSVQ THLKRAFDLL QISNKKMFMA YITANNTIEV FIRMGLFLRK 
KN