Gene Sden_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0303 
Symbol 
ID4019807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp338674 
End bp339672 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content46% 
IMG OID637954284 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_561321 
Protein GI91791670 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.942552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTATT CAAGTAACAC TTCAGGATCT CGTTTAATTA AACGATTACG CCGTCTTCGT 
TCATCTCCTA ATATGCGAGA GCTGGTAAGA GAATACGAAG TCAAATTAAG TGATTTAATC
TATCCGATAT TTATCGAGGA AAATATCACC AACCCAGTGC CCATAACGAG TTTACCTGGT
CTGGTACGGA TTCCTGAAGC TCAGCTTGGC GCTGAAATTG AAGCGCTCAA TGCACTAGGG
ATTCGCTACG TCATGCCATT TGGTATTAGT CACCACAAAG ACAACTGTGG CAGTGATACT
TGGAATAGCA AAGGGCTTTT GGCGAGGATG ATTTCGACCA TTAAGACAGT GTGTCCGAAT
ATGATGGTGA TCCCTGATAT TTGCTTTTGC GAATATACAA CCCATGGTCA TTGTGGCGTG
CTGAAACAGC AGAGCATAGA TAATGATGCC ACAGTTGAAA ACCTCGTGAA GCAATGCATT
AATGCAGCTC GTGCAGGTGC CGATATGTTA GCCCCTTCGG CAATGATGGA TGGACAGGTG
ATGGCTATCC GCCAAGGCTT GGACAAGGAA GGTTTCAGCC ATGTTGCTAT CTTGGCCCAC
GCGGCCAAGT TTGCCTCTTC ATTCTACGGT CCGTTTAGAG ATGCAGTAGC ATGTGAGCTT
AAGGGGGATC GGCATACCTA TCAGCTGGAT TATGCCAATT CGAGACAAGC GCTTCATGAA
GCAATGCTGG ACGAGCAAGA GGGAGCCGAT ATATTAATGA TTAAGCCAGG CACACCATAT
TTAGATATTT TATCCACATT GCGCAGCAAC ACCCTTTTAC CACTTGCCGC CTATCAAGTT
AGTGGTGAAT ATGCTGTGAT TAAATGCGCG GCTAACATCG GCGTCTTAAA TGAGCGGGCA
ACGGTACTGG AAACCCTGAC AGGGTTTAAA CGGGCAGGTG CAGATCTCAT TGTTACTTAT
TACGCCAAGC AGTTTGCTCA ATGGCAACTT AACGAATGA
 
Protein sequence
MPYSSNTSGS RLIKRLRRLR SSPNMRELVR EYEVKLSDLI YPIFIEENIT NPVPITSLPG 
LVRIPEAQLG AEIEALNALG IRYVMPFGIS HHKDNCGSDT WNSKGLLARM ISTIKTVCPN
MMVIPDICFC EYTTHGHCGV LKQQSIDNDA TVENLVKQCI NAARAGADML APSAMMDGQV
MAIRQGLDKE GFSHVAILAH AAKFASSFYG PFRDAVACEL KGDRHTYQLD YANSRQALHE
AMLDEQEGAD ILMIKPGTPY LDILSTLRSN TLLPLAAYQV SGEYAVIKCA ANIGVLNERA
TVLETLTGFK RAGADLIVTY YAKQFAQWQL NE