| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0301 |
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| Symbol | |
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| ID | 4019805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 334795 |
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| End bp | 337950 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637954282 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_561319 |
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| Protein GI | 91791668 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.177385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAG TTGGTATTTA TGAAAAGCTC ATCACTCAGC TGATAGATAA AAGCATCAAT
CGTGATGTGT TTTATCTAGG TGAGCGGCCA TTAGAGAGCG CGGAGGCCAG TGTTTGGCTG
TCGAGGTTTT TGAGCAAGAT TATCGAGTGT GCCATAGGTG CAATTCCCAG TGGCGATAAT
CAACTCACAG AGCAAATCGG CTTAGCAAAT AAGTTGGTGC TGTGGTTAAA AGATCATGTT
CAAGATGATC AATTGATCAC TGAAAATTTA CTCGATAGTA AAGGCCGTAT ATTAACGGCA
CTATTTGATA AAACAAATCC TATAGCGACA GACTTTCCAG CGTTTACTAA GGCTATTTAC
CCGTTAACAG GGTTAAGTCA AAGTGAACTT TTTTGTGGCA GCAATGCCGG AATTTCTTTG
GACACAGAGT TAAAGCGCGA GATCCGTTCA GCGGATAAAA TTTATTGGTT AGTGTCTTTT
ATTAAGTGGG CCGGCATTCG AATTTTTAAA AATGAACTTG AAGAGTTCAC TCGAAGCGGG
AAAACCCTGC GGATCATCAC CACATCTTAT ATGGGGGCGA CAGATGCTAA GGCGGTCGAG
TTTTTAGCTA GCCTGCCTAA CACAGAAGTT AAATTGAGTT ACAACACTAA GCGCGAGCGC
CTGCATGCGA AATCCTATTT ATTTCTGCGT AATACAGGAT TTCATACTGG ATACATAGGT
TCATCGAATT TGTCCCATTC TGCGCTAACC AGTGGCCTTG AATGGAATTT AAAAATAACC
ACCCAAGAAA TCCCCCACAT AATAGATAAA TCCCTCAACA CCTTTGAATC ATATTGGCAA
TCCAGTGAAT TTGAATTATT TAAGGGCGAT ATTGGATCTA AAAACAAGCT TCAAGAAGCA
TTACGTGAGG CTAAGGGCGG TTACAGTGAC GACAGCGCAT TTCATTTTGA TATAAAACCC
TTTGCACATC AGCGAGAAAT CCTTGAACAG CTGGATGTTG AGCGCACAGT TCATCAGCGC
TATAAAAATC TAGTGGTTGC GGCAACGGGC ACAGGTAAAA CACTTATTTC AGCGTTTGAT
TTTGCCCGTT TTTATAAACA GCACCCAGAA GCCAACTTTT TATTCGTGGC TCATCGGCAA
GAAATTCTTA AGCAAGCTCT GTCTGCGTAC CGTGGTGTAT TGAAAAATAA TCAGTTTGGT
GAATTGTGGG TTGCTGAGCA CAAGCCTAAT AGCTACCGGC ACTTGTTTGC TTCGGTACAA
AGCTTAAACC TGCAATTATT AAGCTTACCG CTCACCGTTG ATTTTTATGA TTATATTGTG
ATCGATGAAG TACATCATAT CGCTGCTAAT AGTTATCGAG GATTATTAGC GCATTTCTCA
CCCAAGATTT TATTGGGGTT AACCGCCACG CCAGAGCGTC ATGATGGGCA AAACATTCTG
GATGACTTTT GTGGCGTAAT CGCGGCTGAA ATTCGTTTAC CCGAAGCAAT CAATCAGCGC
TATTTATGTC CTTTCCAATA CTTTGCTATT GATGATGATA CCGATCTTCG CAAAATTAAA
TGGCATCAAG GGCGATATGA TATTGCAGAG CTAAGTCATT TATATACTCA TAATGAACAA
AGAGTTGTGC GCATTATTAG CAGCCTGAAT GATACAGTCA CTGACATTCA TCAAATAAAA
GCTTTGGCGT TTTGTGTCAG CAAAGAACAT GCAGAATACA TGGCGAGTAA GTTTAACCTA
GCCGGTATTA GTGCGGATGT GCTCACCAGT GATAATAGTC ACGAGAGGCA ACAAAAACGC
CAGAGTTTAA TTAGCGGTCA TGTGAACATA TTATGCGTGG TGGATATTTT CAACGAAGGT
GTCGATATTC CAAACGTTGA TACATTATTG TTTTTACGTC CAACTGAAAG CTTAACCATC
TTTTTGCAGC AGTTAGGGCG TGGATTGCGT TTAACCGATG ATAAACAGTG CTGCACGGTA
TTGGACTTTG TGGGTAATTC TCGTGATGAA TATGACTTTT CGCAAAAGTT TCGCGCGCTG
GTTGGTAAAA CGAATCAATC GATTAAAGAT GAGATAACCA ATGATTTTCC TCACTTGCCA
TTAGGCTGTC GGATCGAGCT AGAAGAACAG ACTCAGGCAA TGATTTTACG AAATATTAGC
CGTGCAACCA TGAATGCTAG CAGGCTGCGA CAGCTCATTA ACAATTTTGG GCACCAAAGT
ACGCTTACCT TAAGCTTGGT TAATTTTTTA CGCTTTAATC CAAATGTTAA TTTAGAAGAT
ATTTATAAGC TAAAGATGAG CTGGTTAGAA CTCGTTGAGA GCGCACGTAA AAACCAAATA
AATGAGCCAA ATTTAGATGC GAGTCTGGCT AAAGCCTATT ATCGCGCGAT CAATAATCAT
TTGTTTGCTT GCAGTTCTAT CTCATATTTA CAGTTTTTAA AGCAGCTAAT TATTGATAAT
TTCAGCTTCG ACGATATGGA TGCAACTCAG TGCCAATTTG CACTAATGTG CCATTATAAT
TTTTGGGATA AGTCGGGCGC CGAGCTAGGT TTTACCAGCA TTAAGCAAAG CTTAGCAGCG
TTGAGACATG CTCAATTACA AGCTGAACTC CTTGATGTCA TATCGTTACT TATTGAGCGT
ATACATCATA ATGAACTTGA AATGCTTATC CCTGCAATCC CATCTTTGAA AGTACATTCA
AGATATACCA GAGAGCAGAT ACTTGCAGCC AGTGGCGCAA GTTATTTTGG CAAAAAATCG
ACTGCCCGTG AAGGCGTTTT AGTCCTTAAA GCGCTTAATG TTGAGTTGCT GTTTGTGACC
TTGAAAAAGT CAGTTAAACA ATTTTCACCA ACGACCATGT ACCATGATTA CGCGATCAAT
GAATCGTTAT TCCATTGGCA ATCTCAAAAT AGTGCAAGGC CCGAATATGG CAGAGGTCTG
GGTTACATTG AGCATGAAAA AGAGGGTCGT AAATTGATTT TGTTTGTGCG TGAGCAAGCG
ACAGATGAAA ACGGCCGCAC CATGGGTTTT GTCAATTTTG GCGAAGTGAT TTACATGGCG
CACTCGGGGA CTCAACCCAT GAATATTACT TGGAAATTAA TGACGCCTAT GCCGGACGCT
ATGTGGCATG AAGCTGCAAA ATTAGCAGTA GGATAA
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| Protein sequence | MEQVGIYEKL ITQLIDKSIN RDVFYLGERP LESAEASVWL SRFLSKIIEC AIGAIPSGDN
QLTEQIGLAN KLVLWLKDHV QDDQLITENL LDSKGRILTA LFDKTNPIAT DFPAFTKAIY
PLTGLSQSEL FCGSNAGISL DTELKREIRS ADKIYWLVSF IKWAGIRIFK NELEEFTRSG
KTLRIITTSY MGATDAKAVE FLASLPNTEV KLSYNTKRER LHAKSYLFLR NTGFHTGYIG
SSNLSHSALT SGLEWNLKIT TQEIPHIIDK SLNTFESYWQ SSEFELFKGD IGSKNKLQEA
LREAKGGYSD DSAFHFDIKP FAHQREILEQ LDVERTVHQR YKNLVVAATG TGKTLISAFD
FARFYKQHPE ANFLFVAHRQ EILKQALSAY RGVLKNNQFG ELWVAEHKPN SYRHLFASVQ
SLNLQLLSLP LTVDFYDYIV IDEVHHIAAN SYRGLLAHFS PKILLGLTAT PERHDGQNIL
DDFCGVIAAE IRLPEAINQR YLCPFQYFAI DDDTDLRKIK WHQGRYDIAE LSHLYTHNEQ
RVVRIISSLN DTVTDIHQIK ALAFCVSKEH AEYMASKFNL AGISADVLTS DNSHERQQKR
QSLISGHVNI LCVVDIFNEG VDIPNVDTLL FLRPTESLTI FLQQLGRGLR LTDDKQCCTV
LDFVGNSRDE YDFSQKFRAL VGKTNQSIKD EITNDFPHLP LGCRIELEEQ TQAMILRNIS
RATMNASRLR QLINNFGHQS TLTLSLVNFL RFNPNVNLED IYKLKMSWLE LVESARKNQI
NEPNLDASLA KAYYRAINNH LFACSSISYL QFLKQLIIDN FSFDDMDATQ CQFALMCHYN
FWDKSGAELG FTSIKQSLAA LRHAQLQAEL LDVISLLIER IHHNELEMLI PAIPSLKVHS
RYTREQILAA SGASYFGKKS TAREGVLVLK ALNVELLFVT LKKSVKQFSP TTMYHDYAIN
ESLFHWQSQN SARPEYGRGL GYIEHEKEGR KLILFVREQA TDENGRTMGF VNFGEVIYMA
HSGTQPMNIT WKLMTPMPDA MWHEAAKLAV G
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