Gene Sden_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0296 
Symbol 
ID4019800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp328711 
End bp330219 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content49% 
IMG OID637954277 
Producthypothetical protein 
Protein accessionYP_561314 
Protein GI91791663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGG TTATTCACGC ATCCCAAGAA TTACTGGCCG CATTAGGCAC CATGAGTGAT 
TTTAAAGTGG CGGCGACGTT TGGTGTTCGC CCTTATCAAG TGCGGGATCT GCGTGTGCTG
CATCAAATCC CAACGGTTCA TGCGGATATT GAGCGCAGCA GCTTTGACTG GACGGCGCAA
GCGGATGCCC TGTTGGGCAC TATGCCAGAC ACCCAAGTGG CCCGCTTGCT GGAGACGACC
CGCGCTATCG TTAACGCTCG TCGAGATCAA TTGAACATTT TAGCATTTGT ACCCCCCATA
TTTGAGTTAT TGCGAAAAGG CAGTGCGCGC CACCAGTGGA CGTCGGAAGA GGATCTGCTC
TTAGGGACTG ATTTTGATAA TATTATCGCA GAAAAACTCA ACATAAATCA TTTGCAGGTC
ACTCATAGGC GCTATCAATT AGGCGTAGAT CCGTTTCGCC GCAGCGCCAC TATCGAGTGG
AGTGAACAGA TGCTAGATAA TTTAGGCGAG ATTTCGGATA AAGATTTTGC TGAATATTTT
GAGATTTGCG TGGCCTCTGT GTATTTAAAG CGTCTGCTGT TGTCGATTCC TGCATTGAAT
GCTATCGATC CGCCTTCGCC GCCCAGTATA CCGCCAGCCG TCGTGAGCCT ATTGGGTATC
AAGTCTGATG TCGAGCTTGC AAAGACGTTT GATATCAGTC GTTGGCCCAT AAGAGTCAAT
CGATTATTTC GAGGCTTGGC ACCGGCGCCG AAACTGCCCA GGAAAAATCA AATAAAGTGG
ACCCCAGAGC AGGAAGCCCT GCTAGGCACA GTGAGCGATC GTGAAATTGC CAAGATGATG
GCCGTGAGTC CTTTGAGTGT GAAGTACCGC CGGGAAGCGC TGCATATAAA GCCTTATCGA
ATTTTGTCAG AGCCCGAATG GAATGCGTTA AGATTGTCAG CCCTAGGTCG CAGTGAAGAC
CTAGCCTTAG CTCAAATGTG GCATTGTGAT GTCGCTGCGG TGAGGCACAA GCGCGAATCA
CTCAAGATCC CTGCCCATCA TGGACCTAGA CGTTGGCTGG CGAGTGAATT AGCCTTGTTG
GGAACATTAT CTGATCCCCA AACGGGTAAA CTTATCGGTA TAAGCTCAAC GGCGGTGCGC
AACAAACGCA TTGAAATGAA GATAAAACCT TTGTTGAGTA GCAAGCCGTT TCGTTGGACT
AAAAAACGCC TCGCTCTACT GGGCACCATG GCCGATGAGC GCCTAGCATA TCGCTTTAAA
GTGACCTCGA ACGTGATATC GAAACAACGT ATTAAGCTCA ACATTCCTAT CTGGACCGGT
CACCAAGGCA CATGGGCCAA TCCTGAGGCC GTGGCCAAAT TAGGCACAAT GCCCGATCCC
ATGTTAGCCA AACAGCTTGG CATTACTGCT TCAGCAGTAT TTTGTAAGCG CAAGTCGCTT
GGGATCCCAG CATTTGTTTC ATCAAGCAGC TCGGCTTTCT CAAGCCTAAG CCACTCAAAT
TTACGATGA
 
Protein sequence
MKEVIHASQE LLAALGTMSD FKVAATFGVR PYQVRDLRVL HQIPTVHADI ERSSFDWTAQ 
ADALLGTMPD TQVARLLETT RAIVNARRDQ LNILAFVPPI FELLRKGSAR HQWTSEEDLL
LGTDFDNIIA EKLNINHLQV THRRYQLGVD PFRRSATIEW SEQMLDNLGE ISDKDFAEYF
EICVASVYLK RLLLSIPALN AIDPPSPPSI PPAVVSLLGI KSDVELAKTF DISRWPIRVN
RLFRGLAPAP KLPRKNQIKW TPEQEALLGT VSDREIAKMM AVSPLSVKYR REALHIKPYR
ILSEPEWNAL RLSALGRSED LALAQMWHCD VAAVRHKRES LKIPAHHGPR RWLASELALL
GTLSDPQTGK LIGISSTAVR NKRIEMKIKP LLSSKPFRWT KKRLALLGTM ADERLAYRFK
VTSNVISKQR IKLNIPIWTG HQGTWANPEA VAKLGTMPDP MLAKQLGITA SAVFCKRKSL
GIPAFVSSSS SAFSSLSHSN LR