Gene Sden_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0291 
Symbol 
ID4019795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp324467 
End bp324979 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content45% 
IMG OID637954273 
ProductERCC4 
Protein accessionYP_561310 
Protein GI91791659 
COG category[L] Replication, recombination and repair 
COG ID[COG1948] ERCC4-type nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.148147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTGATA CAGCATTTTT ACAGCGTAAA ATGGTGCTCT ATTATGACGA TAGGGGGCAC 
GCCGACACCC TTATCCATGA GTTATCCCGC TATCAGGATG TATCTCTCGT CAAAAAGCGG 
CTAACGCTCG GTGATTATCA ATGTCATGAT TGGCTTATTG AGCGAAAAAC CTTGGCCGAC 
TTGGTTCATT CACTATGTGA TGGACGCTTA TTCTCACAAG TGGCTAGATT GGCAGCAAGC 
TCTCATCATA CCGCTCTGCT CATCGAAGGC TGCGCTCAAG ATATTGCCAA TTACCAAATC 
CACCGAGAAG CCCTTATGGG GGCGATTTGC GCCATTACAC TCAATTTTCA CATCCCAATA 
CTGCGAAGCC TATCACAACG TGAAACGGCA AAAGTACTGT ATTTTTGCAT CACTCAATTA 
TACCGTAATG ACACTGATTT GCAGCTTACT GGGCGTAAAC CCAAGCGCAA AAAAGTCGCC 
AACTTTTTAT ACTACAAAGT TTGCCTGATG TAG
 
Protein sequence
MADTAFLQRK MVLYYDDRGH ADTLIHELSR YQDVSLVKKR LTLGDYQCHD WLIERKTLAD 
LVHSLCDGRL FSQVARLAAS SHHTALLIEG CAQDIANYQI HREALMGAIC AITLNFHIPI 
LRSLSQRETA KVLYFCITQL YRNDTDLQLT GRKPKRKKVA NFLYYKVCLM