Gene Sden_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0274 
Symbol 
ID4020405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp311154 
End bp311996 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content48% 
IMG OID637954256 
Producthypothetical protein 
Protein accessionYP_561293 
Protein GI91791642 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000430645 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAAA GGGTCGCACT GTACGTTGTT CCCACCCCAA TTGGTAATTT TGGAGACATG 
AGTTCCCGTG CCATTGAGGT GCTAAATCAA GTCGCCTTGA TTGCTTGTGA GGACACGCGC
CACAGCGGAA AACTCCTGAG CCACTTTGGT ATTGCCACCC GAAAAATCGC GCTGCATGAT
CATAATGAAC GTGACCGCGC GCAATGGATT GTTGAAAAAC TCCAAGCTGG TGAATCGATT
GCATTGATTT CAGATGCTGG TACCCCGTTG ATTTCAGATC CCGGCTATCA CTTAGTTAAG
CATGTGCGTG AAGCTGGCTT CGATGTGATC CCTTTGCCTG GACCATGCGC GGCGATTACG
GCTTTAAGTG CATCTGGTTT GCCCTCGGAT AGATTCAGCT TTGAGGGTTT CTTGCCCGCC
AAAGAAAAAG GTCGCTGCGA TAAACTCGAA GCCCTGCGTG AAGATCCGCG CACCTTGATT
TTTTATGAGT CACCTCATCG CATCGAGCAA AGCTTAGCCT CGATAGTGCA AGTGCTGGGT
GAAGACAGGC AAATGGTGAT GGCCCGCGAA GTGACCAAAA CCTTCGAGAC GTTTTTATCT
GGCACAGCCC AGGAAATTCT TGACATCGTC CGTCACGATC CCAATCAGCA AAAAGGTGAA
ATTGTACTCA TGTGTCACGG CTTTGTGACT CAAGATGAAG AGGCCATTCC TACCGTAGCG
CTAAATACCT TAACCTTGTT ATGCGAAGAA TTACCATTGA AGAAAGCCGC AGCGATAGCG
GCGCAAATTC ACGGGTTGAA GAAAAATGCC CTGTATAAAT ATGGTTTAAG CATAGATTTA
TAG
 
Protein sequence
MDQRVALYVV PTPIGNFGDM SSRAIEVLNQ VALIACEDTR HSGKLLSHFG IATRKIALHD 
HNERDRAQWI VEKLQAGESI ALISDAGTPL ISDPGYHLVK HVREAGFDVI PLPGPCAAIT
ALSASGLPSD RFSFEGFLPA KEKGRCDKLE ALREDPRTLI FYESPHRIEQ SLASIVQVLG
EDRQMVMARE VTKTFETFLS GTAQEILDIV RHDPNQQKGE IVLMCHGFVT QDEEAIPTVA
LNTLTLLCEE LPLKKAAAIA AQIHGLKKNA LYKYGLSIDL