| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0271 |
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| Symbol | |
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| ID | 4020402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 308240 |
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| End bp | 308830 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954253 |
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| Product | phosphoheptose isomerase |
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| Protein accession | YP_561290 |
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| Protein GI | 91791639 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0279] Phosphoheptose isomerase |
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| TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000156445 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGAAC GTATTAAAGA CAGCTTTACC GAATCCATTC AGACTAAAAT CGATGCGGCT
GAGGCACTGC CTGAGTCAAT CGAAAAAGCG GCTGAAATGA TGGTGCAATG CCTGCTTGGC
GGTAAGAAAA TCCTTGCCTG TGGTAACGGC GGCAGCGCCG GCGATGCCCA GCATTTTTCA
GCAGAATTGT TAAACCGTTA TGAGATTGAG CGTCCCCCCT TACCTGCTAT TGCCTTGTCT
ACCGATACTT CAACCATCAC CGCGATTGCC AATGACTACA GCTATGATGA AATTTTTTCT
AAGCAGATTT TTGCTCTAGG TCAGCCTGGT GACATTCTGT TAGCCATTTC TACTAGCGGT
AACTCAGGCA ATATCATTAA AGCCATGGAA GCGGCGTTAA GCCGTGATAT GACTATCGTT
GCCCTAACCG GTAAAGATGG CGGCGCCATG GCGGGCCTGA TGAGTGCTGG CGACGTTGAA
ATTCGTGTAC CGTCTAATGT GACAGCCCGC ATTCAAGAAG TTCACTTATT AGTGATCCAT
TGCCTTTGCG ACAACATAGA TAGAACCCTA TTCCCACAGG ATGAAGCATA A
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| Protein sequence | MLERIKDSFT ESIQTKIDAA EALPESIEKA AEMMVQCLLG GKKILACGNG GSAGDAQHFS
AELLNRYEIE RPPLPAIALS TDTSTITAIA NDYSYDEIFS KQIFALGQPG DILLAISTSG
NSGNIIKAME AALSRDMTIV ALTGKDGGAM AGLMSAGDVE IRVPSNVTAR IQEVHLLVIH
CLCDNIDRTL FPQDEA
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