| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0269 |
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| Symbol | |
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| ID | 4020400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 306596 |
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| End bp | 307594 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954251 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | YP_561288 |
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| Protein GI | 91791637 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00577656 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAAC CCATAGTACT TAGCGGCGCG CAGCCATCAG GCGAACTCAC CATAGGCAAT
TATATGGGCG CGCTCCGTCA GTGGGTTGCC ATGCAAGACA GCCATGATTG CCTCTACTGC
GTGGTCGACT TACACGCCAT TACCGTGCGC CAAGACCCAA AAGCCCTGCG TGAAGCCTGT
TTAGATACCT TAGCACTTTA CCTGGCATGC GGCGTTGATC CAAAAAAGAG CACAGTATTT
ATTCAGTCGC AGGTACCTCA GCATACTCAA CTGGGTTGGG CGCTAAATTG CTACACCCAG
ATGGGTGAGC TAAGCCGCAT GACGCAATTT AAAGACAAAT CACAAAAGCA CGCCAGCAAC
ATTAACGTCG GCTTATTTGG CTATCCAGTA TTAATGGCGG CGGATATCTT GTTATATCAA
GCGAACGAAA TACCCGTAGG TCAAGATCAG AAGCAACATT TAGAGCTGAC TCGCGATATC
GCCACTCGCT TTAATAATGC CTATGGTGAC ACCTTCACCA TTCCAGAGCC ATTTATTCCA
GAACATGGCG CTAAGGTGAT GTCACTGCAA GAGCCGTTGA AGAAGATGTC AAAGTCAGAT
GACAATCGTA ACAATGTCAT TGGCCTATTA GAGGATCCTA AAGCCATCCT AAAGAAAGTA
AAAAAAGCGA TGACTGATAG CGAAGAGCCG CCCGTTGTGC GTTTTGATAT GGAACAAAAG
CCTGGGGTGT CTAACTTGCT TAGCCTAATG TCCGGCGTTA CTGGTCAGTC TATCGCGAGC
CTAGAAGCTG AATTTGAAGG CAAGATGTAT GGTCATTTAA AAGGCGCCAC CGGTGAAGCG
GTTGTGGCTA TGCTAGAGCC TTTGCAAGCA AGATATCGCG AGTTCAGAGC GGATCAAAGC
CTGCTTAACC AGGTGATGCA TGATGGCGCC GAACGCGCGC AAGCGAGAGC CGAAGTAACC
CTAAAGAAGG TCTACGAGAA GATAGGTTTA TTGGTATAG
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| Protein sequence | MSKPIVLSGA QPSGELTIGN YMGALRQWVA MQDSHDCLYC VVDLHAITVR QDPKALREAC
LDTLALYLAC GVDPKKSTVF IQSQVPQHTQ LGWALNCYTQ MGELSRMTQF KDKSQKHASN
INVGLFGYPV LMAADILLYQ ANEIPVGQDQ KQHLELTRDI ATRFNNAYGD TFTIPEPFIP
EHGAKVMSLQ EPLKKMSKSD DNRNNVIGLL EDPKAILKKV KKAMTDSEEP PVVRFDMEQK
PGVSNLLSLM SGVTGQSIAS LEAEFEGKMY GHLKGATGEA VVAMLEPLQA RYREFRADQS
LLNQVMHDGA ERAQARAEVT LKKVYEKIGL LV
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