| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0259 |
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| Symbol | |
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| ID | 4020370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 297267 |
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| End bp | 297785 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637954241 |
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| Product | pilus assembly protein, PilQ |
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| Protein accession | YP_561278 |
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| Protein GI | 91791627 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAC ATTTGTCTTT ATTGGCTTTG GTATTCTTGC TAACCGCTTG TGTGGGTGAC
CGTAGCGATC TTGAGTTATT TGTGACTACC ACAAAAGCGC AACACGTAGC CCGGATTCCA
CCGTTAAAAG AACCGCCTAA ATTTGAGCAT TTTGTTTATC AAGCTCAATT AATGCGTAGC
CCATTTGTTC CGCCTTCGCG GGAATTGACC GAAGAAGTGG TCGACACCAG CAAAGATTGT
TTACAGCCTG ATTTACAAAG ACGTAAAGGC CGCTTAGAAA CCTACGCCCT AGATAATTTG
AAAATGCGGG GGACCTTAAG TGAAGGTGAC ACTATTTGGG CGTTATTGGA GTCCACCGAT
GGAAACGTAT ATCGTTTAGG GGTAGGGGAA TTTGTGGGTT TATACCATGG CCGAATTGCT
AAAGTGACGT TGCAATTTAT AGAAATATTA GAATTAATAC CTGATGGTTC AGGTTGCTGG
ACGGAAAGAT CCAGCAACTT AGAATTATCC GGTAAATAA
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| Protein sequence | MMKHLSLLAL VFLLTACVGD RSDLELFVTT TKAQHVARIP PLKEPPKFEH FVYQAQLMRS
PFVPPSRELT EEVVDTSKDC LQPDLQRRKG RLETYALDNL KMRGTLSEGD TIWALLESTD
GNVYRLGVGE FVGLYHGRIA KVTLQFIEIL ELIPDGSGCW TERSSNLELS GK
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