| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0257 |
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| Symbol | |
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| ID | 4020368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 296057 |
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| End bp | 296650 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637954239 |
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| Product | fimbrial assembly |
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| Protein accession | YP_561276 |
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| Protein GI | 91791625 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATA TAAATTTACT CCCTTGGCGT GAAGAAGCCC GAGAGAAGCA AAAGCGTGAT
TATATGGGGA CACTTGCGCT GGTTTTTCTC ATGAGTTCAT TGGTGGCGTA TCTTTCTTTA
AGTTTGATAG AGGGAATGAC TGAAAACCAA AGGTCACGCA ATGCCTACTT GAAATCCGAA
ATTAGTTTGC TCGATGCGCA AATAGAAGAG ATAAGTAAAA TTACCGAGCG GAAAAAAGAC
ATCGAGCGGC GCACAGAAAT TATTCTCAAT TTGCAGCAAT CTAGGAATCT TCCCACTCAT
GTTTTAGATG AATTGGTGCG TATCGTGCCG CCGGGAATTT ACTTATCAAG CATAGATAAA
AAGGGCAGCG TACTTTGGAT AGAAGGGCGC AGTGAATCTA ATAATAATGT TGCCAATATG
ATGCGTAAGG TAAAGACCTC TGAATATTTG GACGACCCGA GTATGCAGTC TATCGTGGCG
CAAAATGAAG AGCTTCGCTT GTTACAGCGC TTTAAGTTAA GAATAGCCAT TCGTGAAACG
AGTAGTTTTG AGCTCGATGC TGGTGGCAAT ACCGCCCAAG GAGCGAAGAA ATGA
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| Protein sequence | MANINLLPWR EEAREKQKRD YMGTLALVFL MSSLVAYLSL SLIEGMTENQ RSRNAYLKSE
ISLLDAQIEE ISKITERKKD IERRTEIILN LQQSRNLPTH VLDELVRIVP PGIYLSSIDK
KGSVLWIEGR SESNNNVANM MRKVKTSEYL DDPSMQSIVA QNEELRLLQR FKLRIAIRET
SSFELDAGGN TAQGAKK
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