Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0244 |
Symbol | |
ID | 4017991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 278944 |
End bp | 279738 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637954226 |
Product | SMC protein-like protein |
Protein accession | YP_561263 |
Protein GI | 91791612 |
COG category | [R] General function prediction only |
COG ID | [COG3910] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTG ATGAAAAACC TTATCTGCGT AGCATAGCCC TCAAACATCA AGGTTTGGCA GAGGCTAAGG TGACGCTCAT TGATGGTGAG TTCCATGATG AGTCCGCTGT CAGGGTTCAA GATTGTTATC CATTTACCAT ACCTGCTCTC GCAGGTTTTG ATAGCCTAGA CTTTGATGCC GATGTGACCT TCTTTGTGGG GGAGAATGGT TCAGGAAAGT CCACCCTATT GGAAGCCATA GCTGTCGCTA TGGGCTTAAA CGCCGAAGGG GGCAATAAAA ATACCCATTT TGCCACCAAG GTGAGTCATT CAAACCTTGG TTATTACCTT AAAACCATCA AAAGTTTTAA GAAACCTAAA GACAGCTATT TCCTGCGGGC GGAGAGTTTT TATAATCTAG CCTCTTATAT GGAAGAGGAT GGCAGAGAGG CGTATTTGGG CAGCTATGGC GGCACCTCTT TACATCAGCA GTCACACGGC GAATCATTTA TGGCAACCTT ACTGCATAAG TTCAGAGGCC AAGGCTTATA CCTGATGGAT GAGCCAGAAG CCGCGTTGTC ACCCAGCAGG CAATTAGCCG CTTTGTCTGC AATACATCAA CTAGTGGAAA ATAAGTCGCA ATTTATTATC GCCACCCATT CACCCATTTT ACTGGCTTAC CCCAGAGCGA AGATTTATCA ATTCTCCAAC CAAGGGATAG TACAGATTAC TTATCAAGAG ACAGAGCATT ATCAAATCAC TAAGGCTTTT CTAAATCAGC CAGAAAAGTT ACTGGCAAGC TTAGGGGTGG GCTAA
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Protein sequence | MNFDEKPYLR SIALKHQGLA EAKVTLIDGE FHDESAVRVQ DCYPFTIPAL AGFDSLDFDA DVTFFVGENG SGKSTLLEAI AVAMGLNAEG GNKNTHFATK VSHSNLGYYL KTIKSFKKPK DSYFLRAESF YNLASYMEED GREAYLGSYG GTSLHQQSHG ESFMATLLHK FRGQGLYLMD EPEAALSPSR QLAALSAIHQ LVENKSQFII ATHSPILLAY PRAKIYQFSN QGIVQITYQE TEHYQITKAF LNQPEKLLAS LGVG
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