| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0243 |
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| Symbol | |
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| ID | 4017990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 276435 |
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| End bp | 278834 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954225 |
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| Product | RNA binding S1 |
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| Protein accession | YP_561262 |
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| Protein GI | 91791611 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCTA CATCTCAGAC TATTGCCCAG ATCATCGCTC AGGAACTCAA TGTCCGTGAG
CAACAAGTGA TGGCGACTAT TGCCTTGCTA GACGAAGGCT CGACCGTTCC TTTTATCGCG
CGCTATCGTA AAGAGGCCAC CGGCGGCTTA GATGATACTC AGCTGCGTAA CTTATACAGC
CGTTTAGGAT ATTTGCGCGA GCTTAATGAT CGCCGTCAAG TGGTGCTGTC GAGTATTAAA
GCTCAAGATA AGCTCACCCC AGCCTTAGAG CATGAGATAA ATCAGGCGGA CAGTAAAACC
CGCCTCGAAG ACTTGTATTT ACCCTTTAAA CCAAAGCGCC GTACCAAGGG CATGATTGCC
ATCGAAGCTG GGCTGGAGCC TTTGGCGGAT TTTCTGCTGG CTAATCGCAA TGCAGATATC
GACGCAAAAG CCGCTGAATT TATTAATTCT GCTGCGGGCT TTAGCGATGA GAAAGCTGTG
CTCGAAGGCG CACGTTATAT CTTGATGGAA CGCTTCGCCG AAGATGCTGA ACTTATTCGC
AAAGTACGTA GTCACCTTGC CCAGCATGCG GTGCTGGAAA GTAAGGTGAT GAAAGGCAAA
GAAAAAGAAG GGTCAAAATT CCGCGATTAT TTTGAGCATA CAGAAGCCCT TCATAAGGTG
CCCTCTCACC GTGCGCTCGC CATGCTACGT GGCCGCAATG AAAGCATGTT AAGTTTATCG
ATGAATGCCG ACCCTGATAC TCAGGCTATC GATGGCAGTT ATTGCGAGGT GATTATCGCC
GATCATTTCA ACTTGAAGTT GAGCGATACT AGTGTCGATG CTTGGCTTAA AACTGTGGTG
ACTGCGACTT GGCGCATCAA GATTGCGCTG CAAATGGAAA ATGAAATGAT TTCCCAGATG
CGTGAGCGCG CCGAAGAAGA AGCCATTAAA GTCTTCGCCC GTAATCTTGG CGATCTATTG
ATGGCGCCAC CTGCAGGGGC GAAAGCCACC ATGGGACTAG ATCCTGGCCT TAGAACCGGA
GTCAAAGTCG CGATAGTGGA TAACACAGGT AAATTTGTGG CTCATACTGT GATTTACCCC
CATGCGCCGC AAAATGTGTG GGACAAATCC ATTCGCACCT TGGCTAATCT TGTGAATATG
CACAAGGTTG AGCTTATTGC CATAGGTAAC GGCACAGCAT CACGGGAAAC TGATAAGTTG
GCAGGCGAAG TCATCGCAAG CCTTAAAGAC ACCCACCCAA ATCTAACTAA AATTATGGTC
AGCGAAGCGG GCGCCTCTGT GTATTCGGCC TCCGAGCTTG CGGCTGAAGA ATTCCCTAAC
TTAGATGTGT CTATTCGCGG CGCCGTGTCT ATTGCTCGCC GCCTGCAAGA CCCGCTTGCC
GAGTTGGTCA AAATTGAGCC TAAGTCTATT GGTGTGGGTC AATATCAGCA CGATGTGAGT
CAGAGTCAGT TGTCATCATC CTTGGATGCG GTGATCGAAG ACTGCGTGAA CGGCGTCGGT
GTGGATCTCA ATATGGCCTC GGCGCCATTG CTGGCACAGG TTGCGGGCTT AAATAAAACC
TTGGCGAAGA ATCTCGTAGA TTACCGTGAT GAGCACGGCC AATTTACTAA CCGTAAGCAA
CTGCTCAAAG TGGCACGCCT CGGGCCTAAA GCCTTTGAGC AGGCGGCAGG CTTCTTGCGT
ATTCGCGGGG GTGATAACCC CTTAGATGCC TCATCAGTCC ATCCTGAAGC GTATAAATTA
GTGGAAACCA TAGCCCAAAA GACCCAGCAA GCCATAGACA GCCTGATTGG CAATAGCGGT
TTACTGTCTA GTATCAAAGC CGAAGATTTT GTCAGCGATG AATTTGGTTT GCCGACCATC
AATGACATCT TGGCCGAGCT TGATAAACCA GGGCGCGACC CTCGCGGCGA GTTTAAGACT
GCAAGCTTTA AAGAGGGTGT TGAAGAGCTG AAGGACTTAA AGCCTGAGAT GATTTTAGAA
GGTGTGGTCA CTAATGTGAC TAACTTTGGT GCTTTTGTTG ATGTGGGTGT ACATCAAGAC
GGTTTAGTGC ATATTTCATC CTTAACTGAC AAATTTGTTA GCGATCCGCA CACTATAGTC
AAAGCTGGCG ATGTGGTTAA AGTTAAAGTG ATGGAAGTGG ACATTGAGCG CCGCCGTATT
GGCCTAAGCA TGCGTCTGGA TGAGGCCATT AATACCAGCG CTAGCAGCGT GAAGCCTAAG
CAAGATAATC GTGGCAGTGC TGCGAATAAA ACGAGCACTA ACACAGGCAT TACCAACAAA
GGTGCGAGCG CTAATAACGG GAAACCTACC GGCAGAAAAG CGCCTGCGCC CAAAGCGGCC
CCTGCTAACG CAGCTATGGG CAACGCCTTC GCTGATGCCT TTGCAAAAAT GAAGAAATAA
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| Protein sequence | MHSTSQTIAQ IIAQELNVRE QQVMATIALL DEGSTVPFIA RYRKEATGGL DDTQLRNLYS
RLGYLRELND RRQVVLSSIK AQDKLTPALE HEINQADSKT RLEDLYLPFK PKRRTKGMIA
IEAGLEPLAD FLLANRNADI DAKAAEFINS AAGFSDEKAV LEGARYILME RFAEDAELIR
KVRSHLAQHA VLESKVMKGK EKEGSKFRDY FEHTEALHKV PSHRALAMLR GRNESMLSLS
MNADPDTQAI DGSYCEVIIA DHFNLKLSDT SVDAWLKTVV TATWRIKIAL QMENEMISQM
RERAEEEAIK VFARNLGDLL MAPPAGAKAT MGLDPGLRTG VKVAIVDNTG KFVAHTVIYP
HAPQNVWDKS IRTLANLVNM HKVELIAIGN GTASRETDKL AGEVIASLKD THPNLTKIMV
SEAGASVYSA SELAAEEFPN LDVSIRGAVS IARRLQDPLA ELVKIEPKSI GVGQYQHDVS
QSQLSSSLDA VIEDCVNGVG VDLNMASAPL LAQVAGLNKT LAKNLVDYRD EHGQFTNRKQ
LLKVARLGPK AFEQAAGFLR IRGGDNPLDA SSVHPEAYKL VETIAQKTQQ AIDSLIGNSG
LLSSIKAEDF VSDEFGLPTI NDILAELDKP GRDPRGEFKT ASFKEGVEEL KDLKPEMILE
GVVTNVTNFG AFVDVGVHQD GLVHISSLTD KFVSDPHTIV KAGDVVKVKV MEVDIERRRI
GLSMRLDEAI NTSASSVKPK QDNRGSAANK TSTNTGITNK GASANNGKPT GRKAPAPKAA
PANAAMGNAF ADAFAKMKK
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