Gene Sden_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0235 
Symbol 
ID4017982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp267896 
End bp269383 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content45% 
IMG OID637954218 
ProductATP-binding region, ATPase-like protein 
Protein accessionYP_561255 
Protein GI91791604 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC ATAACAAGCT GTTTTTAATT CTATTTAGCT TCAGCTTAAT CCTAGTGATT 
ATGTTAGTGG TACTGATGCA GTGGAGCATA GCTAAAGGCA TGGTTGACTA TGTAAACACC
AAAGAGGTTG AAGCCTTAAA GCCTGTGATC ACAGAGCTTG CTCAAATTTA TAAAGAAGAT
CACGGCTGGC AGGCCATGAC AGGCAGCCAC CCTAGATTTC GCCAGCTCAT TGAAACCCAG
CTTCAAGGTG ATGAATTTGC CCCTAGACGT CACAATTTTC CGCCCCCGCG CAGACCTCTT
CGAGATAGGC CGCCAAAAGA CGGGCCACAT GCTTTGCACA AAGGCCCAAA GGATAAACAC
CCTGCAGGAA GATTACCGCC ACCAGAGCAC GAAGCACGCT ATGCGCTATT AGATGAAAAT
GATGGATTGG TTGTGGGGAA ATACCTAGAT AACTTGAAGT ACAGCAAAAC CCCCATAGTA
CTTGATGGTG TAACGGTAGG TTATTTTGCC GTCTCCAAGC GGGAGAGATT AACCCAAGGC
TATGAAGTCG AATTTATTGA GCAGCAACAG CAGTATCTCT GGCTTATCGC ATTGTTAGCC
ATTGCCTTAG TGCTGCTTAT TACCCGCCCC TTGGCTCGTC ACTTAGTCGA GCCTATCAAG
GTCATCACCC GTGGAATGCA CAAGTTAACC CAAGGGGATT ATCAACATAC CGTCGATTTA
AAACGACAAG ATGAATTTGG CCAATTAAGT CGAGACTACA ATGAGCTGGC GATCATATTG
GCAGCAAATG ACAGTGCTAG AAAACGTTGG TTAGCCAACA TTTCTCATGA ACTGCGTACG
CCAGTGGCTA TTTTACGTGG TGAGCTAGAA GCCATGATCG ATGAGGTCCG CCCTCTGACT
ATGGATAATG TGGGTTCAGC CCATGATGAA GTGAAGCATC TGCAACGGCT TATCGAAGAT
CTACACTTAC TCACCAGTGC CGATATTGGG GCCATGCATT ACCGCAAACA AGAGGAAGAG
CTAACTCAAG TTTTAGCTAA TGAGCTGGAT AAATATCGCA GTTATTTAGC AAGCGCAGGC
ATAACGCTAA ATATAGAGCC GACCATTGAG TCAAAGGCAA GCCAGCACCC TATACTTATC
TATGCTGATA CCACTCGCTT ATATCAATTA TTTGAAAATA TTATTAATAA TGCAGTGAAG
TATTCTTCAG CCACTGTGCT TACCCTCTCT GTAAAGCAAG AAATAAGCTC AAGCAACATA
GTGTTAATCA CTTTTGAGGA TAACGGTGTG GGTGTAGAAG AGAAGCACTT AGCGCACTTA
TTTGAGCATC TGTATCGCGT CGATGATTCA CGCAATCGTC AAACCGGGGG CTCGGGGCTT
GGATTATCCA TTTGCCGTCA TATCGTCGCT GCGCATCAAG GCGAAATTTG GGCTGAAAAA
TCCTCCTTAG GCGGACTCGC TATTCACATC CGCCTTAAGA TCATTTAA
 
Protein sequence
MKIHNKLFLI LFSFSLILVI MLVVLMQWSI AKGMVDYVNT KEVEALKPVI TELAQIYKED 
HGWQAMTGSH PRFRQLIETQ LQGDEFAPRR HNFPPPRRPL RDRPPKDGPH ALHKGPKDKH
PAGRLPPPEH EARYALLDEN DGLVVGKYLD NLKYSKTPIV LDGVTVGYFA VSKRERLTQG
YEVEFIEQQQ QYLWLIALLA IALVLLITRP LARHLVEPIK VITRGMHKLT QGDYQHTVDL
KRQDEFGQLS RDYNELAIIL AANDSARKRW LANISHELRT PVAILRGELE AMIDEVRPLT
MDNVGSAHDE VKHLQRLIED LHLLTSADIG AMHYRKQEEE LTQVLANELD KYRSYLASAG
ITLNIEPTIE SKASQHPILI YADTTRLYQL FENIINNAVK YSSATVLTLS VKQEISSSNI
VLITFEDNGV GVEEKHLAHL FEHLYRVDDS RNRQTGGSGL GLSICRHIVA AHQGEIWAEK
SSLGGLAIHI RLKII