| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0222 |
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| Symbol | |
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| ID | 4017942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 243070 |
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| End bp | 243744 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954198 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_561242 |
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| Protein GI | 91791591 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGATT GGAATACCAT AGATACTGTG CTTTTAGACA TGGACGGCAC CTTGTTGGAT
TTGCACTTTG ATACGCATTT TTGGCTTACA CTAGTACCGC AACAATTAAG CCAGCAAAGG
AATATACACC TGCACGCGGC AAAGACCTTA GTGGAACAGG CCTATAAAAA GGTGCAGGGC
ACCTTAGAAT GGTATTGCTT GGATTATTGG CAGCAAGCAT TAGGTTTGGA TATTTTAACG
TTGCATTACT CCATTGCAGA ACGCATTCAG TTGCGTCAAG ACAGCATGCC GTTTTTACAA
GCCTTGGGGG CAGCCAATAA AAAGCGAATT TTATTTACTA ATGCCCACCC TAAAAGTTTA
AGCCTGAAGC TTGAGCACAC TGAGCTTGCA TCGGGATTAG ATGCCATCCT ATCTAGTCAT
GAAACGGGTT ACCCTAAGGA ACATCCAGAG TTTTGGCGTC ATGGATTGGC AAAATTTAAC
TTAGACCCTG CTCGCTGCCT GTTTATTGAT GACAGCGAAG TGATCCTCGC CGCATCGCGC
CGCGCTGGTA TTGGCCACCA GCTTGGCATA ATGAATCCAG ATAGCAAAAA GCCTAATAAA
CGGTTCAGCG ACTTCCCTGC CATCGATGAT TATCACTTAC TCTTGATGGA TTCACGTTCG
ACCCCGCTCA GCTGA
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| Protein sequence | MFDWNTIDTV LLDMDGTLLD LHFDTHFWLT LVPQQLSQQR NIHLHAAKTL VEQAYKKVQG
TLEWYCLDYW QQALGLDILT LHYSIAERIQ LRQDSMPFLQ ALGAANKKRI LFTNAHPKSL
SLKLEHTELA SGLDAILSSH ETGYPKEHPE FWRHGLAKFN LDPARCLFID DSEVILAASR
RAGIGHQLGI MNPDSKKPNK RFSDFPAIDD YHLLLMDSRS TPLS
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