| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0218 |
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| Symbol | |
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| ID | 4017938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 237282 |
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| End bp | 238808 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954194 |
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| Product | transciptional regulator |
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| Protein accession | YP_561238 |
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| Protein GI | 91791587 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAACG ATCAAAGCCT AATGCGAAAG TCTCATTTTT TGGGAACCAA GATACGTAAT
CTACGTAAAC GCAACCATTT GACCATGGAA GACTTGTCGG CGCGCTGCGT GCGCATGGAT
GCGGGTTCTG CCCCCTCGGT ATCCTATTTA TCCATGATAG AGCGTGGCAA ACGAGTACCA
AGCGCCGCTA TGCTTAGCGT GATTGCCGCT GTGTTTCAAA AGGAAGTAGA GTGGTTCCTC
GATGATGTAC CGGAAGAGGC TGCCATTACC CCAGATAAGG GCCGTCATGG GGGGATAAGC
GGCATGGCGT TAGAGCCAAG TTTTTTATTT TCTAACGATA TCTTACAAAT CGCCATCCCT
GAAATGTTGT CACAAACCGG GACCACAGGT CGTCAATTCG CCCATTTGTT GATCCGCGCG
CATCAGGAGC ATCATCAAAA CCATTTCCCC GATCTCGAGC GCGCCGCAGA AGAGATTGGC
CAGAAGCGCA TGCCCCTGAG CGCCGATGAT ATGCTCGATA TCGCTAAGGG TATGGGCCTA
CGTATCAAGT GGATAGATGC CACTCCCCAA GAAGTCATCG ACGAAATGGG GCTGAGTTCC
CGTCAGCTGG TCACGTCATT TTTTGAGCCT CCAAGCACCA TTTATGTCAA TAAAGCCCTA
AAAAATAGAC CTTACAGGCT GAAATACGAC TTGGCCGTGC ATATAGGTCA CTGCGTTTTA
CACAATAAAG ATGGCCTTAA AAGCGTGATG ACCTCTGGAC GTAGGGAAGA TAGCGCCGAT
GATGGCACTC AATCTAACTC ACTCAATGCT CAGGATATTC TTCATGCATG GCGTGACTTT
GAATCAAGCT TTTTTGCCGG AGCCTTACTT TGCCCCAAAG TGCCCTTTAG GCAGCTTTTA
GATCGCTGCG GCTATGAAAT CGATGTGCAT AAACAATTGC AGGTATCGGC GTCGGTGGCA
ATGCGGCGTA TGACTGTGGT ATCCCCTTAT CCCCATTGGC ACTATTTTGA TGCCTACGCC
CAAGGAAAAC TGCAGGCCGT GTATCGAGGC AATGGTATTC CACTGCCTTG GGGCAATATG
CGTTTAGTGC AGGACCCTTG TCAGCACTGG GCGGTATTTC GCATGATCAA TGAGCCCACA
GTCGGAACCT CGGCGCAAAT TTCCATTTTG AATGTGGGCA ATGAGCCTAG AATTTACTGT
TGTGAGTCAA TCAAAGTAGA AGATTCCGCC GGTAATGCCC ATGTGCTTTG TGCGGGAATT
GATCTTAATC CCGCCATTGA AGCTCAAGGT AAAGACGCGC TCACCATAGC TCAGGACTTA
AAACAGGCTT GTGTGGATTC AGGGGGATCT GTAGTCATTC CGAAAAACAT TAAGCAAGAT
TTAACCAGTG TCGCCAAAAT CCTTAATATC AATTGGATAG AGCGCGGCAT TAAAAATGAA
GCTCGGCTTA TCTGCTCTCG AGGCGGAGTT TGCCCTAGGC AACCCAGTTG CTATGCCGCC
GGCCGGCCGC AATGTGATGA TGAGTAA
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| Protein sequence | MRNDQSLMRK SHFLGTKIRN LRKRNHLTME DLSARCVRMD AGSAPSVSYL SMIERGKRVP
SAAMLSVIAA VFQKEVEWFL DDVPEEAAIT PDKGRHGGIS GMALEPSFLF SNDILQIAIP
EMLSQTGTTG RQFAHLLIRA HQEHHQNHFP DLERAAEEIG QKRMPLSADD MLDIAKGMGL
RIKWIDATPQ EVIDEMGLSS RQLVTSFFEP PSTIYVNKAL KNRPYRLKYD LAVHIGHCVL
HNKDGLKSVM TSGRREDSAD DGTQSNSLNA QDILHAWRDF ESSFFAGALL CPKVPFRQLL
DRCGYEIDVH KQLQVSASVA MRRMTVVSPY PHWHYFDAYA QGKLQAVYRG NGIPLPWGNM
RLVQDPCQHW AVFRMINEPT VGTSAQISIL NVGNEPRIYC CESIKVEDSA GNAHVLCAGI
DLNPAIEAQG KDALTIAQDL KQACVDSGGS VVIPKNIKQD LTSVAKILNI NWIERGIKNE
ARLICSRGGV CPRQPSCYAA GRPQCDDE
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