Gene Sden_0208 details

Gene Information

• Locus tag: Sden_0208
• Symbol: coaD
• ID: 4017928
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 227843
• End bp: 228349
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637954184
• Product: phosphopantetheine adenylyltransferase
• Protein accession: YP_561228
• Protein GI: 91791577
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0669] Phosphopantetheine adenylyltransferase
• TIGRFAM ID: [TIGR00125] cytidyltransferase-related domain; [TIGR01510] pantetheine-phosphate adenylyltransferase, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.125923
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACAGAA GAGCCATTTA TCCGGGTACC TTTGATCCTG TGACCAATGG TCATGCGGAC 
CTCATTGAAC GGGCCGCAAA GCTATTTAAA CATGTCATTA TCGGCATCGC CGCTAACCCT 
TCTAAGCAAC CTAGATTCAC CCTAGAGGAG CGAGTCGAAC AGCTCACCCT AGTCACTGCG 
CACCTTGATA ATGTTGAGGT GGTTGGTTTT AGTGGCTTGC TGGTGGACTT TGCCCGAGAT 
CAAAAGGCCA GTGTGCTAGT GCGTGGTCTC AGGGCCGTGT CTGATTTTGA GTATGAGTTT 
CAGCTGGCCA ATATGAATCG CAGGCTAAGC CCAGATCTTG AAAGTGTGTT TCTCACACCG 
GCAGAAGAAA ACTCATTTAT TTCGTCAACC TTAGTCAAGG AAGTCGCCTT ACATGGCGGT 
GATGTTAGTC AATTTGTTCA TCCACAAGTG GCCTTGGCCC TTAAAGAAAA AATAGCAGCA 
ATGAAAGCGA ATAAAGGTAA TAAGTAG 

 

Protein sequence

MHRRAIYPGT FDPVTNGHAD LIERAAKLFK HVIIGIAANP SKQPRFTLEE RVEQLTLVTA 
HLDNVEVVGF SGLLVDFARD QKASVLVRGL RAVSDFEYEF QLANMNRRLS PDLESVFLTP 
AEENSFISST LVKEVALHGG DVSQFVHPQV ALALKEKIAA MKANKGNK