| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0196 |
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| Symbol | rplQ |
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| ID | 4017916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 209537 |
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| End bp | 209932 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954172 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_561216 |
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| Protein GI | 91791565 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00364658 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCATC GTAAGAGTGG TCGTCAACTA AACCGCAACA GCAGTCATCG CCAAGCTATG
TTCCGTAACA TGGCTTGCTC AATAGTTCGT CATGAGATTA TCAAGACAAC TGTAGCTAAA
GCGAAAGAAC TGCGCCGCGT AGTTGAACCT CTAATAACAC TTGCTAAAGT AGACAGCGTT
GCAAATCGCC GTTTAGCTTT CGCTCGTACT CGCGACGCTG AAGTCGTAGG TAAGTTATTT
ACAGAATTGG GTCCACGCTT CCAGGAACGT CCTGGTGGTT ACACTCGTAT TCTAAAGTGC
GGTTTACGCG CCGGTGATAA AGCCCCAATG GCTTACATCG AGCTAGTAGG TCGTCCTGAA
GCTGCTGAAG CTGTTGATGT TGAAGCTGCT GAGTAA
|
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| Protein sequence | MRHRKSGRQL NRNSSHRQAM FRNMACSIVR HEIIKTTVAK AKELRRVVEP LITLAKVDSV
ANRRLAFART RDAEVVGKLF TELGPRFQER PGGYTRILKC GLRAGDKAPM AYIELVGRPE
AAEAVDVEAA E
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