| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0190 |
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| Symbol | secY |
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| ID | 4017910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 205470 |
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| End bp | 206810 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637954166 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_561210 |
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| Protein GI | 91791559 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000711222 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC CAGGACTTGA TTTAAAAAGC GCGAAAGGCG GTTTATCTGA ACTGAAAACA
CGTCTCCTGT TCGTGATTGG CGCAATTATC GTCTTTAGAG CCGGTTCGTT TGTGCCAATT
CCTGGTATTG ACGCAGCTGT ATTAGCAGAG CTATTTGCTC AGCAAAAAGA TACCATCCTG
GGCATGTTTA ACATGTTCTC GGGTGGTGCT TTAGAGCGTG CCTCTATCTT TGCATTAGGT
ATCATGCCGT ATATTTCGGC ATCGATTATC ATGCAATTAT TGACTGTCGT GCATCCTGCA
CTCGCTGAAT TGAAAAAAGA AGGCGAATCA GGACGTAAGA AAATCAGTCA GTACACGAGA
TATGGAACGC TCGTGCTGGG TACTCTCCAG TCGATCGGTA TTGCAACAGG TTTACCTAAT
CTTATGCCAG GCCTTGTGGC CAACGCAGGA TTCGGATTTT ACTTTGTCGC AGTTGTCAGC
TTAGTCACAG GAACTATGTT CCTAATGTGG TTAGGTGAGC AAATTACCGA ACGTGGTATA
GGTAACGGTA TCTCGATATT AATTTTCGCA GGTATTGTTG CTGGATTACC ATCTGCTATC
GGCTCAACAG CCGAGCAGGC GCGTCAAGGT GACTTGAATG TACTCGTATT ATTGCTACTT
GCGGTAATCG TATTCGCCGT CACTTATTTG GTAGTGTTTG TTGAGCGTGG TCAGCGTCGT
ATCGTCGTTA ACTATGCTAA ACGTCAGCAA GGCCGCAAGG TGTTCGCTGC ACAAAGTACA
CATTTACCTT TGAAAGTGAA TATGGCTGGT GTGATTCCAC CAATATTTGC GTCCAGCATT
ATTTTGTTCC CAGGCACACT GGCTCAGTGG TTTGGTGCAA ATGAGTCCAT GTCATGGTTA
AGCGATTTCG CTTTGGCTGT GTCACCAGGA CAACCGCTGT ACTCATTATT GTATGCGACA
GCAATTATTT TCTTCTGTTT CTTCTACACT GCGTTGGTGT TTAACCCACG TGAGACAGCT
GATAACTTGA AGAAGAGTGG TGCGTTCATT CCCGGGATTC GTCCTGGAGA ACAGACTTCG
CGTTACATTG ATAAAGTGAT GACTCGCCTG ACATTGGCAG GTGCGTTATA CATTACCTTT
ATCTGCTTAA TTCCGGAGTT CATGTTAATT GCGTGGAAAG TACAGTTCTA TTTTGGCGGT
ACTTCGCTAC TAATTATAGT AGTCGTGATC ATGGACTTCA TGGCTCAGGT TCAGACCCAT
ATGATGTCAC ATCAGTATGA GTCTGTGATG AAGAAAGCAA ACTTAGTGAA CAAAGCGAAT
TTAGATCGCT TTGGTCGATA A
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| Protein sequence | MAKPGLDLKS AKGGLSELKT RLLFVIGAII VFRAGSFVPI PGIDAAVLAE LFAQQKDTIL
GMFNMFSGGA LERASIFALG IMPYISASII MQLLTVVHPA LAELKKEGES GRKKISQYTR
YGTLVLGTLQ SIGIATGLPN LMPGLVANAG FGFYFVAVVS LVTGTMFLMW LGEQITERGI
GNGISILIFA GIVAGLPSAI GSTAEQARQG DLNVLVLLLL AVIVFAVTYL VVFVERGQRR
IVVNYAKRQQ GRKVFAAQST HLPLKVNMAG VIPPIFASSI ILFPGTLAQW FGANESMSWL
SDFALAVSPG QPLYSLLYAT AIIFFCFFYT ALVFNPRETA DNLKKSGAFI PGIRPGEQTS
RYIDKVMTRL TLAGALYITF ICLIPEFMLI AWKVQFYFGG TSLLIIVVVI MDFMAQVQTH
MMSHQYESVM KKANLVNKAN LDRFGR
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