| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0186 |
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| Symbol | rplR |
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| ID | 4017906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 203969 |
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| End bp | 204319 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954162 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_561206 |
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| Protein GI | 91791555 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000395091 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAGA AAACATCTCG CTTACGTCGC GCTTTACGTG CACGTAAGAA GATCCAAGAG
CTAGGCGTGA ACCGTCTGGT TGTACATCGT ACACCGCGTC ACATTTATGC TCAGGTGATC
AGTCCTGAAG CTCAGGTGTT GGCAGCTGCT TCAACCGTTG AAAAAACGGT TAAAGAGCTA
CTAAAGAGTA CCGGTAACGT AGATGCGGCA AAAGCAGTAG GTAAAATTGT TGCTGAGCGT
GCGATCGAGA AGGGCGTAGC AATAGTTGCG TTCGACCGTT CTGGTTTCAA GTATCACGGA
CGTGTGGCTG CATTAGCAGA CGCTGCTCGT GAAGCTGGCC TGAAGTTCTA A
|
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| Protein sequence | MDKKTSRLRR ALRARKKIQE LGVNRLVVHR TPRHIYAQVI SPEAQVLAAA STVEKTVKEL
LKSTGNVDAA KAVGKIVAER AIEKGVAIVA FDRSGFKYHG RVAALADAAR EAGLKF
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