Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0181 |
Symbol | rplX |
ID | 4017863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 201814 |
End bp | 202128 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637954157 |
Product | 50S ribosomal protein L24 |
Protein accession | YP_561201 |
Protein GI | 91791550 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0198] Ribosomal protein L24 |
TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000129578 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCAA AAATACGTCG TGAAGACGAA ATAATTGTAC TAGCAGGTAA AGACAAGGGT AAACGCGCAA AAGTTTCTCA AGTCCTACCA ACTGGTAAAT TAATTGTTGA AGGCATCAAT CTAGTTAAAA AGCACCAGAA GCCAAACCCA CAATTGGGCG TGACTGGCGG CGTTATCGAG AAAGAAGCAC CGATACAAAC ATCAAACGTA GCGATCTTTA ACCAAGCCAC AGGCAAGGCA GATCGTGTTG GTTTCCGATT CGAAGACGGC AAAAAAGTCC GTTTCTTTAA ATCGAATAGT GAACTCATTA AGTAA
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Protein sequence | MAAKIRREDE IIVLAGKDKG KRAKVSQVLP TGKLIVEGIN LVKKHQKPNP QLGVTGGVIE KEAPIQTSNV AIFNQATGKA DRVGFRFEDG KKVRFFKSNS ELIK
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